BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396706 =	131 (0.970)	89 (0.660)	36/128	6.6	0.46	coding (588/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397797	75 (0.350)	89 (0.660)	36/128	6.6	0.46	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 210 total aligned reads displayed.


ATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTG  >  NC_014034/1396606‑1396806


aTTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCAtcg                                                                                                      <  2:1561278/101‑1 (MQ=255)


 tttCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCAtcgt                                                                                                     <  2:4069519/101‑1 (MQ=255)


  tgaaggggttACGACGGGTGACTGGTTTCGGGTCGGTCCCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCAtcgt                                                                                                     <  2:3613729/93‑1 (MQ=25)


   tcgtcgCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCAtcgtcg                                                                                                   >  1:812471/1‑101 (MQ=255)


    cgtcgCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGc                                                                                                  >  1:1690223/1‑101 (MQ=255)


    cgtcgCTTACGACGCCTATCGGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGc                                                                                                  <  2:3809787/101‑1 (MQ=255)


      tcgCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTc                                                                                                >  2:2864460/1‑101 (MQ=255)


       tgcttctgtcgCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcc                                                                                               <  2:1280102/92‑1 (MQ=255)


       cgCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcc                                                                                               <  2:2118427/101‑1 (MQ=255)


       cgCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcc                                                                                               <  1:3192197/101‑1 (MQ=255)


       cgCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcc                                                                                               <  1:1081654/101‑1 (MQ=255)


         cTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccc                                                                                             <  2:1626466/101‑1 (MQ=255)


         cTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTcccc                                                                                             <  2:488527/101‑1 (MQ=255)


          ttACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTccccc                                                                                            >  1:2153216/1‑101 (MQ=255)


          ttACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTccccc                                                                                            >  1:2694771/1‑101 (MQ=255)


            acgacgCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCcg                                                                                          >  2:3784572/1‑101 (MQ=255)


              gacgCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTNTTGCGATCCGTCATCGTCGCTCCCCCcgcg                                                                                        >  1:1319114/1‑101 (MQ=255)


              gacgCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCTGTCATCGTCGCTCCCCCcgcg                                                                                        <  1:3115468/101‑1 (MQ=255)


              gacgCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCcgcg                                                                                        >  2:4033500/1‑101 (MQ=255)


                cgCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCggg                                                                                      <  1:3701601/101‑1 (MQ=255)


                 gCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCgggg                                                                                     <  1:3610353/101‑1 (MQ=255)


                 gCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCgggg                                                                                     >  1:2937282/1‑101 (MQ=255)


                  ccTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCggggg                                                                                    >  1:1952752/1‑101 (MQ=255)


                   cTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGc                                                                                   <  1:3120959/101‑1 (MQ=255)


                   cTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGc                                                                                   <  1:3362901/101‑1 (MQ=255)


                    tATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCg                                                                                  >  1:138791/1‑101 (MQ=255)


                    tATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCg                                                                                  >  2:2519545/1‑101 (MQ=255)


                    tATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCg                                                                                  >  2:138889/1‑101 (MQ=255)


                     aTCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGt                                                                                 <  1:1128201/101‑1 (MQ=255)


                        tGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                              >  1:1751501/1‑101 (MQ=255)


                         gATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                             <  1:1357690/101‑1 (MQ=255)


                         gATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                             <  1:1606438/101‑1 (MQ=255)


                          aTTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  1:3853110/101‑1 (MQ=255)


                          aTTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  2:3082935/101‑1 (MQ=255)


                           tttCGGGGCGCT.CCCCCCGCGGAGGCGTGGATCTAAACCATGCGGCG...ATAGCTCGCTTTTGCGATCCGTCATCTTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                           <  1:3625181/101‑1 (MQ=37)


                            ttCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                          >  1:3792158/1‑101 (MQ=255)


                              cGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        <  2:3209007/101‑1 (MQ=255)


                              cGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                        >  2:257359/1‑101 (MQ=255)


                               gggTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                       <  1:199136/101‑1 (MQ=255)


                                 gTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccc                                                                     <  1:3434829/101‑1 (MQ=255)


                                  tCGCT.CCCCCCGAGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCt                                                                    <  1:1167942/101‑1 (MQ=255)


                                   cGCT.CCCCCCGCGGGGGCGTGGATCGAAACCCCGCGGCGTCCCGAAGACGGTCTTCTGGTGCCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                      >  2:3229790/1‑101 (MQ=2)


                                   cGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTg                                                                   >  2:2338522/1‑101 (MQ=255)


                                   cGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTg                                                                   >  2:2981958/1‑101 (MQ=255)


                                    gCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAAGTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGt                                                                  <  2:1685359/101‑1 (MQ=255)


                                    gCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGt                                                                  >  2:2711797/1‑101 (MQ=255)


                                     cT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTc                                                                 >  2:1936001/1‑101 (MQ=255)


                                      t.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTcc                                                                <  1:2229565/101‑1 (MQ=255)


                                      t.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTcc                                                                >  2:639357/1‑101 (MQ=255)


                                      t.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTcc                                                                <  1:477486/101‑1 (MQ=255)


                                           cccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCa                                                            <  2:2131009/101‑1 (MQ=255)


                                           cccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCa                                                            <  1:3278306/101‑1 (MQ=255)


                                           cccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCa                                                            <  1:3731220/101‑1 (MQ=255)


                                            ccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCat                                                           <  2:3048772/101‑1 (MQ=255)


                                            ccGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCat                                                           >  1:2472903/1‑101 (MQ=255)


                                             cgcgGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCata                                                          <  2:2053178/101‑1 (MQ=255)


                                             cgcgGGGGCGTGGATCAAAACCATGCGGCG...CTACCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGTTCGAAACCCTGTCCCTCata                                                          <  2:587023/101‑1 (MQ=38)


                                               cgGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtg                                                        <  1:2340730/101‑1 (MQ=255)


                                                 ggggCGTGGATCGAAACCACGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgct                                                      <  2:1521674/101‑1 (MQ=255)


                                                  gggCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGNGTGGATCGAAACCCTGTCCCTCATAtgctg                                                     >  1:1566560/1‑101 (MQ=255)


                                                   ggCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATAtgctgc                                                    <  1:2519729/101‑1 (MQ=255)


                                                     cGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCa                                                  <  2:2449872/101‑1 (MQ=255)


                                                     cGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCa                                                  <  2:1982552/101‑1 (MQ=255)


                                                      gTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCAc                                                 >  1:4127416/1‑101 (MQ=255)


                                                       tGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACg                                                >  1:4212543/1‑101 (MQ=255)


                                                       tGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACg                                                <  1:2307855/101‑1 (MQ=255)


                                                           tCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGc                                            <  2:73200/101‑1 (MQ=255)


                                                            cGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGcc                                           <  1:3784829/101‑1 (MQ=255)


                                                            cGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGcc                                           >  2:3512852/1‑101 (MQ=255)


                                                              aaaCCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCt                                         <  1:3448617/101‑1 (MQ=255)


                                                                  cATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAg                                     <  1:3949752/101‑1 (MQ=255)


                                                                   aTGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGt                                    <  1:973133/101‑1 (MQ=255)


                                                                   aTGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGt                                    >  2:1333701/1‑101 (MQ=255)


                                                                     gcggcg...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCg                                  >  2:3020432/1‑101 (MQ=255)


                                                                      cggcg...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGc                                 <  1:585744/101‑1 (MQ=255)


                                                                         cg...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcc                              >  2:3959011/1‑101 (MQ=255)


                                                                         cg...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTcc                              >  1:920983/1‑101 (MQ=255)


                                                                               tAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTccccc                           <  1:2758412/101‑1 (MQ=255)


                                                                                 aCTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCcg                         <  2:189359/101‑1 (MQ=255)


                                                                                  cTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCcgc                        >  2:1080370/1‑101 (MQ=255)


                                                                                   tCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCcgcg                       >  1:2067557/1‑101 (MQ=255)


                                                                                   tCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCcgcg                       <  2:2151489/101‑1 (MQ=255)


                                                                                    cGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCgg                      <  1:1524933/101‑1 (MQ=255)


                                                                                     gCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCggg                     >  2:2800954/1‑101 (MQ=255)


                                                                                     gCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCggg                     <  2:1736635/101‑1 (MQ=255)


                                                                                       tctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCCCggggg                   >  2:3361139/1‑101 (MQ=255)


                                                                                       tctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCAGATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCggggg                   >  1:2079337/1‑101 (MQ=255)


                                                                                        ctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGc                  <  2:1876446/101‑1 (MQ=255)


                                                                                        ctTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGc                  <  1:3310511/101‑1 (MQ=255)


                                                                                         ttGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCg                 <  2:812393/101‑1 (MQ=255)


                                                                                         ttGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCg                 >  2:3645613/1‑101 (MQ=255)


                                                                                            cGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTgg              >  2:1826130/1‑101 (MQ=255)


                                                                                               tCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATc           <  1:4033761/101‑1 (MQ=255)


                                                                                                ccGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCg          <  1:2864679/101‑1 (MQ=255)


                                                                                                ccGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCg          >  2:2167540/1‑101 (MQ=255)


                                                                                                 cGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGa         >  1:3314602/1‑101 (MQ=255)


                                                                                                  gTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa        >  1:1935115/1‑101 (MQ=255)


                                                                                                    cATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc      >  2:1410348/1‑101 (MQ=255)


                                                                                                    cATCGTCGCGCCCCCCGCGGGGGCGCGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc      <  1:3108151/101‑1 (MQ=255)


                                                                                                        gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCgtg  <  1:441219/101‑1 (MQ=255)


ATTTCGTCGCTTACGACGCCTATCTGATTTCGGGTCGCT.CCCCCCGCGGGGGCGTGGATCGAAACCATGCGGCG...ATAACTCGCTCTTGCGATCCGTCATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTG  >  NC_014034/1396606‑1396806

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 40 ≤


ATCG