New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1396835 =128 (0.930)91 (0.660) 37/130 6.6 0.47 coding (717/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 = 1397797 75 (0.350)intergenic (+101/+1797) RCAP_rcc01307/RCAP_rcc01309 hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 241 total aligned reads displayed.

AACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1396735‑1396935
                                                                                                        |                                                                                                    
aaCCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.gg                                                                                                      <  1:1741206/101‑1 (MQ=255)
aaCCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.gg                                                                                                      >  1:538282/1‑101 (MQ=255)
 aCCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.ggg                                                                                                     >  2:3730648/1‑101 (MQ=255)
   cctgtatcccATAGGCTGCCACGATGCCCTCGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTc                                                                                                   <  2:2051277/92‑1 (MQ=37)
   ccTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTc                                                                                                   <  1:3691177/101‑1 (MQ=255)
     tGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGc                                                                                                 <  2:3654265/101‑1 (MQ=255)
     tGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGc                                                                                                 >  1:827461/1‑101 (MQ=255)
       tCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTc                                                                                               >  1:2002340/1‑101 (MQ=255)
        cccTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTcc                                                                                              <  2:326463/101‑1 (MQ=255)
           tCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTccccc                                                                                           >  2:2547163/1‑101 (MQ=255)
             atatGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCcg                                                                                         <  1:4221290/101‑1 (MQ=255)
              tatGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCcgc                                                                                        >  2:2248677/1‑101 (MQ=255)
               atGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCcgcg                                                                                       >  2:2725756/1‑101 (MQ=255)
                tgctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCgg                                                                                      <  2:3223832/101‑1 (MQ=255)
                 gctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCggg                                                                                     >  1:3391895/1‑101 (MQ=255)
                 gctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCggg                                                                                     >  1:436154/1‑101 (MQ=255)
                 gctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGCCGCTCCCCCCGCggg                                                                                     >  2:1495035/1‑101 (MQ=255)
                  ctgcCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCgggg                                                                                    <  2:920898/101‑1 (MQ=255)
                       aCGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTg                                                                               <  1:471253/101‑1 (MQ=255)
                       aCGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTg                                                                               <  1:1063257/101‑1 (MQ=255)
                        cGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTgg                                                                              >  2:1071239/1‑101 (MQ=255)
                        cGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGGgg                                                                              >  1:2260516/1‑101 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCcgcgagatcggaag                                                                             >  1:3509952/1‑91 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGGGTGGa                                                                             >  1:1058055/1‑101 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             >  2:1959849/1‑101 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             <  2:1825744/101‑1 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             >  2:3357352/1‑101 (MQ=255)
                         gATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATAATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGGGTGGa                                                                             >  1:3315933/1‑101 (MQ=255)
                           cccatcgccgTCGCGCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                             <  1:2459914/92‑1 (MQ=0)
                            gCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                          <  1:1483493/101‑1 (MQ=255)
                             cccTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                         >  1:1077588/1‑101 (MQ=255)
                             catcgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                           >  1:4200071/8‑101 (MQ=2)
                              ccTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        <  1:1401152/101‑1 (MQ=255)
                              ccTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        <  1:2368617/101‑1 (MQ=255)
                                cgccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                        <  2:2383602/97‑1 (MQ=2)
                                 tGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                     <  2:4229183/101‑1 (MQ=255)
                                 gccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                       >  1:3178015/4‑101 (MQ=2)
                                 gccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                       >  2:143458/4‑101 (MQ=2)
                                  ggggcccTCCCCCCGGGGGGGCGTGGATCGAAACCGGGTGGAT...GATCATGCAGCGCGGACGGCTTGGGGCCCCCCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                     <  2:3752885/95‑1 (MQ=25)
                                  gAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCg                                                                    >  1:1138171/1‑101 (MQ=255)
                                  ccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      <  2:1614915/99‑1 (MQ=2)
                                  ccgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                      <  2:651385/99‑1 (MQ=2)
                                     tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatg                                                                   <  2:3549510/101‑4 (MQ=2)
                                     tCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTc                                                                 >  1:1847200/1‑101 (MQ=255)
                                        cTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggct                                                                <  1:2607577/101‑7 (MQ=2)
                                        cTCCCCCCGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggct                                                                >  2:3953913/1‑95 (MQ=2)
                                         tCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCaga                                                             <  1:3576140/101‑1 (MQ=255)
                                           cccccGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAgaga                                                           <  1:3934752/101‑1 (MQ=255)
                                            ccccGCGGGGGGGGGGATCGAAACCGTGTGGAT...GGTCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGAt                                                          <  1:1912947/101‑1 (MQ=255)
                                            ccccGCGGGGGCGTGGATCGAAACGGCGTAGATCTCGGTCTGGGTGCGCTCGCGG.TT.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcatggctatgg                                                            <  1:1303194/101‑11 (MQ=0)
                                            ccccGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGAt                                                          <  2:2461386/101‑1 (MQ=255)
                                              ccGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAg                                                        <  2:1764280/101‑1 (MQ=255)
                                               cgcgGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGa                                                       >  1:3003180/1‑101 (MQ=255)
                                               cgcgGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGa                                                       <  1:1871525/101‑1 (MQ=255)
                                               cgcgGGGGCGGGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGa                                                       <  2:3997498/101‑1 (MQ=255)
                                                 cgGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAcc                                                     <  1:3528708/101‑1 (MQ=255)
                                                 cgGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGAcc                                                     >  1:969813/1‑101 (MQ=255)
                                                  gggggCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACcg                                                    <  2:2937060/101‑1 (MQ=255)
                                                  gggggCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCGGCCCCGGGATAGAccc                                                    >  2:1525183/1‑100 (MQ=38)
                                                   ggggCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGGCCAGAGATAGACcgc                                                   >  2:756717/1‑101 (MQ=255)
                                                       cGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCgg                                               >  2:56064/1‑101 (MQ=255)
                                                       cGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCgg                                               >  1:4021350/1‑101 (MQ=255)
                                                        gTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGa                                              >  1:8620/1‑101 (MQ=255)
                                                        gTGGATCGAAACCGTGTGGAT...GAACATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGa                                              <  1:2963823/101‑1 (MQ=255)
                                                         tGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCgggc                                             >  2:3883074/1‑99 (MQ=255)
                                                          ggATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcc                                            >  1:281535/1‑101 (MQ=255)
                                                           gATCGAAACCGTGTGAAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcct                                           >  1:709995/1‑101 (MQ=255)
                                                            aTCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcctc                                          >  2:1386094/1‑101 (MQ=255)
                                                            aTCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGAcctc                                          >  2:3594016/1‑101 (MQ=255)
                                                               gAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACctcctc                                       >  2:1865115/1‑101 (MQ=255)
                                                               gAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACctcctc                                       >  2:1423221/1‑101 (MQ=255)
                                                                aaaCCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGCAATAGCCCGCGCGGACCTCCTCa                                      >  2:1717448/1‑101 (MQ=255)
                                                                aaaCCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCa                                      <  2:2180702/101‑1 (MQ=255)
                                                                aaaCCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCa                                      <  1:1817397/101‑1 (MQ=255)
                                                                aaaCCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCa                                      >  2:4140656/1‑101 (MQ=255)
                                                                 aaCCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAg                                     >  1:2638134/1‑101 (MQ=255)
                                                                 aaCCGTGTGGAT...GATCATGCAGCGCGGACGGCGT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAg                                     <  2:2097041/101‑1 (MQ=255)
                                                                   ccGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGAc                                   <  2:3300778/101‑1 (MQ=255)
                                                                    cGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACg                                  <  1:915776/101‑1 (MQ=255)
                                                                        tgGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGc                              <  2:4042237/101‑1 (MQ=255)
                                                                          gat...gatCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTc                            >  1:3251616/1‑101 (MQ=255)
                                                                          gat...gatCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTc                            >  2:1909043/1‑101 (MQ=255)
                                                                            t...gatCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccc                          <  2:2772552/101‑1 (MQ=255)
                                                                                 atCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccccc                        <  2:2621215/101‑1 (MQ=255)
                                                                                 atCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTccccc                        >  1:3867272/1‑101 (MQ=255)
                                                                                 atCATGCAGCGCGGACGGCTT.GGGACGCTCCCCCGGCGGGGGCGTGGATCAAAAACGGTCCAGAGATAGACCGCGCGGACCTCCGCAGACGTCGCTccccc                        >  2:2824867/1‑101 (MQ=255)
                                                                                        aGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgggg                 <  1:639434/101‑1 (MQ=255)
                                                                                        aGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgggg                 <  1:56079/101‑1 (MQ=255)
                                                                                        aGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgggg                 >  1:3712005/1‑101 (MQ=255)
                                                                                        aGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCgggg                 <  2:343647/101‑1 (MQ=255)
                                                                                         gcgcGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCggggg                >  2:3896463/1‑101 (MQ=255)
                                                                                          cgcgGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGc               <  2:3113507/101‑1 (MQ=255)
                                                                                          cgcgGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGc               <  1:3431981/101‑1 (MQ=255)
                                                                                            cgGACGGCGC.GGGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGt             <  2:449911/101‑1 (MQ=255)
                                                                                              gACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCCCCCCCCGCGGGGGCGTgg           >  2:3482932/1‑101 (MQ=255)
                                                                                                cGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGAt         >  1:3900094/1‑101 (MQ=255)
                                                                                                   cTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGa      <  2:1138077/101‑1 (MQ=255)
                                                                                                   cTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGa      >  1:801560/1‑101 (MQ=255)
                                                                                                   cTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGa      <  1:2791716/101‑1 (MQ=255)
                                                                                                     t.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa    >  2:1275712/1‑101 (MQ=255)
                                                                                                        |                                                                                                    
AACCCTGTCCCTCATATGCTGCCACGATGCCCTTGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGTGTGGAT...GATCATGCAGCGCGGACGGCTT.GGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGTCCAGAGATAGACCGCGCGGACCTCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA  >  NC_014034/1396735‑1396935

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG