New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1397002176 (1.240)33 (0.230) 10/134 19.1 0.18 coding (884/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 1397836 = 127 (0.600)intergenic (+140/+1758) RCAP_rcc01307/RCAP_rcc01309 hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 244 total aligned reads displayed.

CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATGTCGTC  >  NC_014034/1396902‑1397102
                                                                                                       |                                                                                                         
   cGCCCCCCCCGCGGGGGCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAg                                                                                                        <  2:3315692/101‑1 (MQ=255)
      tCCCCCCGCGGGGGCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtc                                                                                                     >  1:1948322/1‑101 (MQ=255)
      cccccccGCGGGGGCGTGGATCGAAACAGCCTGCACGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtc                                                                                                     <  1:2167685/100‑1 (MQ=255)
       ccccccGCGGGGGCGTGGATCGAAACTGCGTGCGCGCCATGAATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaat                                                                                                       >  1:1720171/1‑99 (MQ=2)
          cccGCGGGGGCGTGGATCGAAACTGCGTGCGCGCCATGAATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgcc                                                                                                    <  1:422083/101‑6 (MQ=0)
          cccGCGGGGGCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCtcg.tcg                                                                                                >  1:3518724/1‑101 (MQ=255)
            cgcgGGGGCGTGGATCGAAACTGCGTGCGCGCCATGAATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCaatgccga                                                                                                  >  1:910829/1‑94 (MQ=0)
              cgGGGGCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTgg                                                                                            <  2:2891677/101‑1 (MQ=255)
               gggggCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGt                                                                                           >  1:391132/1‑101 (MQ=255)
               gggggCGGGGAACGAAACAGCCGGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGt                                                                                           <  2:3097959/101‑1 (MQ=255)
                   gCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGc                                                                                       <  2:1797123/101‑1 (MQ=255)
                   gCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGc                                                                                       <  2:2961625/101‑1 (MQ=255)
                     gTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCTCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCg                                                                                     >  2:1088904/1‑101 (MQ=255)
                        gagcGAAACATCCTGCGCGGC.CGCA.TCTGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAc                                                                                  <  1:3373219/98‑1 (MQ=255)
                        gATCGAAACCGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAc                                                                                  <  1:4132035/101‑1 (MQ=255)
                        gATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAc                                                                                  <  2:2067419/101‑1 (MQ=255)
                         aTCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.g                                                                                <  2:3891940/101‑1 (MQ=255)
                         aTCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.g                                                                                <  2:2586443/101‑1 (MQ=255)
                           cGAAGCAGCCGGCGCGGC.CGCA.TCTGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GAt                                                                              <  2:2401862/101‑1 (MQ=255)
                            gAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCTCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTCGTCAGCCGGAC.GATg                                                                             >  1:476185/1‑101 (MQ=255)
                                cAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGGC.GATGTCC...g                                                                      >  2:381142/1‑101 (MQ=255)
                                cAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTAC...g                                                                      <  2:3518471/101‑1 (MQ=255)
                                 aGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...Gt                                                                     >  2:1068396/1‑101 (MQ=255)
                                  gCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTc                                                                    <  2:3251375/101‑1 (MQ=255)
                                    cTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GGTGTCC...GTCGc                                                                  >  1:3720226/1‑101 (MQ=255)
                                    cTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGc                                                                  >  2:2782294/1‑101 (MQ=255)
                                     tGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCt                                                                 <  1:3125621/101‑1 (MQ=255)
                                      gcgcGGC.CGCA.GCGGCGTCCGCCTGCGTG.GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTc                                                                <  1:3296079/101‑1 (MQ=255)
                                        gcgGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTccc                                                              <  2:1358614/101‑1 (MQ=255)
                                        gcgGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTccc                                                              <  2:2162050/101‑1 (MQ=255)
                                          ggC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTccccc                                                            >  2:1825463/1‑101 (MQ=255)
                                          ggC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTccccc                                                            >  1:1038889/1‑101 (MQ=255)
                                           gC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTcccccc                                                           <  1:1410445/101‑1 (MQ=255)
                                            c.cGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCcg                                                          >  1:2729697/1‑101 (MQ=255)
                                              cGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCcgc                                                         <  2:559397/101‑1 (MQ=255)
                                               gCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGGAACATAAGCTCG.TCGTTGGTCAGCAGGAC.GATGTCC...GTCGCTCCCCCcgcg                                                        >  1:3555133/1‑101 (MQ=255)
                                                 a.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGCCAGCCGGAC.GATGTCC...GTCCCTCCCCCCGCggg                                                      >  1:3644290/1‑101 (MQ=255)
                                                     ggCTTCCGCGTGCGTG.GTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGc                                                   <  2:952332/101‑1 (MQ=255)
                                                      gCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCg                                                  >  1:1353852/1‑101 (MQ=255)
                                                       cTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCgg                                                 >  2:544704/1‑100 (MQ=255)
                                                       cTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGt                                                 <  2:4212281/101‑1 (MQ=255)
                                                         tCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTgg                                               >  2:1991795/1‑101 (MQ=255)
                                                           cGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGAt                                             <  1:1222848/101‑1 (MQ=255)
                                                           cGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGAt                                             >  1:1784257/1‑101 (MQ=255)
                                                            atcccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGa                                              <  1:2586171/93‑1 (MQ=2)
                                                              cccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATc                                            <  1:2422780/95‑1 (MQ=2)
                                                               tGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCN...GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         >  1:249754/1‑101 (MQ=255)
                                                               tGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         <  1:3472301/101‑1 (MQ=255)
                                                               tGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         <  1:2830518/101‑1 (MQ=255)
                                                               tGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         <  2:3450813/101‑1 (MQ=255)
                                                               ccgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCg                                           >  1:2921276/6‑101 (MQ=2)
                                                               cagcggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                            >  2:41432/8‑101 (MQ=2)
                                                               cagcggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                            >  2:3168397/8‑101 (MQ=2)
                                                                cgccg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGa                                          <  1:1280086/97‑1 (MQ=2)
                                                                agcggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                           >  1:594992/7‑101 (MQ=2)
                                                                 cGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                       >  2:3573389/1‑101 (MQ=255)
                                                                  gTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt                                      <  2:249709/101‑1 (MQ=255)
                                                                  gTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt                                      <  1:1088998/101‑1 (MQ=255)
                                                                  gTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCCCTCCCCCCGCGGGGGCGCGGGCCGaaagt                                      >  1:3958755/1‑99 (MQ=37)
                                                                  cggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                         >  1:104632/5‑101 (MQ=2)
                                                                   tG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg                                     >  1:1909/1‑101 (MQ=255)
                                                                   ggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaca                                        >  1:4196142/4‑99 (MQ=2)
                                                                   ggcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                        >  1:1645675/4‑101 (MQ=0)
                                                                   cg.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                       <  2:1289406/100‑1 (MQ=2)
                                                                    g.gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcg                                      >  2:2272359/1‑100 (MQ=2)
                                                                      gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGACTGGATCGAAACTGcc                                   >  1:715042/1‑101 (MQ=255)
                                                                        cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaagatcg                                   >  2:6540/1‑96 (MQ=0)
                                                                        cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaact                                   >  2:1607713/1‑97 (MQ=2)
                                                                        cGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaact                                   >  2:332635/1‑97 (MQ=2)
                                                                         gCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgt                                  >  1:1424694/1‑99 (MQ=2)
                                                                         gCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCGCCACG.TCTTGGAACAGCGTGCC.ATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcaactg                                  >  2:2676826/1‑96 (MQ=2)
                                                                         cgatctcccGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgt                                  <  2:3109597/95‑3 (MQ=2)
                                                                          cTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgta                                 >  2:4025181/1‑98 (MQ=2)
                                                                           tCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCtt                              >  2:2506676/1‑101 (MQ=255)
                                                                           cccccccGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCtt                              <  2:691260/100‑1 (MQ=255)
                                                                            ccccccGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgtaga                               >  1:2193943/1‑96 (MQ=2)
                                                                            ccccccGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTg                             >  2:2846190/1‑101 (MQ=255)
                                                                            ccccccGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTg                             >  1:3084131/1‑101 (MQ=255)
                                                                              ccccGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgtagatc                             >  1:2367063/1‑94 (MQ=2)
                                                                               cccGGGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGt                          <  2:1162674/101‑1 (MQ=255)
                                                                                ccGTGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgtagatctc                           <  1:3797443/101‑10 (MQ=2)
                                                                                ccGCGGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgtagatctc                           <  2:1202502/101‑10 (MQ=2)
                                                                                 cgcgGGGGCGTGGATCGAAACATCAGCTTGACCGCATCGAAGCTGGTCACATCGCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGcgtagatctcg                          <  1:4158057/101‑11 (MQ=0)
                                                                                    gggggCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATgg                     <  1:841734/101‑1 (MQ=255)
                                                                                    gggggCGTGGATAGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGCAACTGGCGGCTTGAGTGATgg                     >  1:3350459/1‑101 (MQ=38)
                                                                                      gggCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATgggg                   <  2:1586523/101‑1 (MQ=255)
                                                                                        gCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGgcg                 <  2:3644037/101‑1 (MQ=255)
                                                                                        gCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGgcg                 >  2:2594030/1‑101 (MQ=255)
                                                                                           tGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGa              >  1:3857324/1‑101 (MQ=255)
                                                                                           tGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGa              >  2:1428169/1‑101 (MQ=255)
                                                                                           tGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGa              >  1:3694879/1‑101 (MQ=255)
                                                                                                cGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGGAACTGCCGTCTTGAGTGATGGGGCGCGAGcaca         >  1:3604314/1‑101 (MQ=255)
                                                                                                cGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGcaca         <  1:1681646/101‑1 (MQ=255)
                                                                                                  aaaCATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATg       >  1:2018896/1‑101 (MQ=255)
                                                                                                  aaaCATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATg       >  2:833732/1‑101 (MQ=255)
                                                                                                   aaCATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATgt      >  1:2972715/1‑101 (MQ=255)
                                                                                                    aCATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCCCATgtc     >  2:3356885/1‑101 (MQ=255)
                                                                                                    aCATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATgtc     <  1:1525287/101‑1 (MQ=255)
                                                                                                    aCATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATgtc     >  1:3582200/1‑101 (MQ=255)
                                                                                                     aaTCAGCTCG.TCCTTGATCAGCCGGAC.GATGACC...GTCAGAGCCCCCGCGGGGGCGTAGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATgtcg    <  1:1391324/100‑1 (MQ=255)
                                                                                                       |                                                                                                         
CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGCCTGCGCGGC.CGCA.TCGGCTTCCGCCTGCGTG.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCAGCTCG.TCGTTGGTCAGCCGGAC.GATGTCC...GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCTTGAGTGATGGGGCGCGAGCACATGTCGTC  >  NC_014034/1396902‑1397102

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG