BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1395631 =	122 (0.860)	43 (0.300)	4/134	24.1	0.22	intergenic (+443/‑488)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	= 1434381	186 (0.880)	43 (0.300)	4/134	24.1	0.22	intergenic (‑160/‑798)	RCAP_rcc01334/RCAP_rcc01335	hypothetical protein/Fis family GAF modulated sigma54 specific transcriptional regulator
Rejected: Position hash score below cutoff.

Only 100 of 195 total aligned reads displayed.


CATCTCGGTGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT  >  NC_014034/1395531‑1395731


      ggTGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGc                                                                                                    <  2:2418301/101‑1 (MQ=255)


        tGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTc                                                                                                  >  2:344238/1‑101 (MQ=255)


         gCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc                                                                                                 >  1:3451549/1‑101 (MQ=255)


         gCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc                                                                                                 >  1:3389267/1‑101 (MQ=255)


            gTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTccccc                                                                                              >  2:3186163/1‑101 (MQ=255)


            gTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTccccc                                                                                              >  2:3322584/1‑101 (MQ=255)


             tCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc                                                                                             <  2:1354553/101‑1 (MQ=255)


             tCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc                                                                                             <  1:3813103/101‑1 (MQ=255)


             tCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc                                                                                             <  1:3678315/101‑1 (MQ=255)


             tCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc                                                                                             <  2:2983493/101‑1 (MQ=255)


             tCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc                                                                                             <  2:3247176/101‑1 (MQ=255)


             tCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc                                                                                             >  1:2091045/1‑101 (MQ=255)


                cTCCTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcgcg                                                                                          <  2:944416/101‑1 (MQ=255)


                   gTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgggg                                                                                       <  2:422659/101‑1 (MQ=255)


                     ccAGCCGGCCTGCTCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGc                                                                                     <  1:2462197/101‑1 (MQ=255)


                      cAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCg                                                                                    >  2:3388951/1‑101 (MQ=255)


                       aGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGGGACCACCTTGCGGATTGGCACTTTCGCGGGGCGAAGCGGCGGCCCCCCCGCGGGGGCgg                                                                                   >  2:1661418/1‑100 (MQ=37)


                       aGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGt                                                                                   <  2:1885692/101‑1 (MQ=255)


                        gCCGTCCTGCTCGTCGCACCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTg                                                                                  <  2:2052059/101‑1 (MQ=255)


                          cGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGa                                                                                <  1:2007841/101‑1 (MQ=255)


                            gCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                              <  2:3787731/101‑1 (MQ=255)


                             ccTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGGGGATCg                                                                             >  1:48529/1‑101 (MQ=255)


                              cTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGCGGCTCGa                                                                            >  1:1048361/1‑101 (MQ=255)


                                gCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                          >  1:2499383/1‑101 (MQ=255)


                                gCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                          <  1:1749794/101‑1 (MQ=255)


                                   cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                       >  1:2609573/1‑101 (MQ=255)


                                   cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                       >  2:3342271/1‑101 (MQ=255)


                                   cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                       <  2:3543336/101‑1 (MQ=255)


                                   cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                       >  1:434054/1‑101 (MQ=255)


                                    gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTc                                                                      >  2:3572247/1‑101 (MQ=255)


                                    gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc                                                                      >  1:2154496/1‑101 (MQ=255)


                                     tcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCt                                                                     <  1:1827496/101‑1 (MQ=255)


                                     tcgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCt                                                                     <  1:1133407/101‑1 (MQ=255)


                                      cgCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTg                                                                    <  1:1661533/101‑1 (MQ=255)


                                       gCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGc                                                                   >  1:1913278/1‑101 (MQ=255)


                                       gCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCCCGGGGGCGTGGATCGAAACATCTGc                                                                   >  1:3055888/1‑101 (MQ=255)


                                         tCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCAt                                                                 <  2:660415/101‑1 (MQ=255)


                                           cccccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGt                                                               <  2:1799200/101‑1 (MQ=255)


                                              ccGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGt                                                            <  1:3522220/101‑1 (MQ=255)


                                               cgcgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTc                                                           <  1:3356290/101‑1 (MQ=255)


                                                gcgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcg                                                          >  2:1816331/1‑101 (MQ=255)


                                                gcgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcg                                                          >  2:7069/1‑101 (MQ=255)


                                                 cgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg                                                         >  1:960583/1‑101 (MQ=255)


                                                 cgGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcgg                                                         >  2:511482/1‑101 (MQ=255)


                                                  gggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc                                                        >  1:787532/1‑101 (MQ=255)


                                                  gggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc                                                        <  1:661712/101‑1 (MQ=255)


                                                  gggggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTcggc                                                        >  1:1613343/1‑101 (MQ=255)


                                                     ggCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCg..g.g                                                  >  1:362220/1‑101 (MQ=255)


                                                      gCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.Gc                                                 >  1:3153448/1‑101 (MQ=255)


                                                       cGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCa                                                <  2:2090907/101‑1 (MQ=255)


                                                       cGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCa                                                <  2:1150966/101‑1 (MQ=255)


                                                       cGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCa                                                <  1:627161/101‑1 (MQ=255)


                                                         tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGt                                              <  2:2642983/101‑1 (MQ=255)


                                                         tGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGt                                              <  2:2142036/101‑1 (MQ=255)


                                                          ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGtt                                             >  1:890488/1‑101 (MQ=255)


                                                          ggATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGtt                                             >  2:4113940/1‑101 (MQ=255)


                                                             tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGa                                          <  1:4022781/101‑1 (MQ=255)


                                                             tCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGa                                          >  2:1737025/1‑101 (MQ=255)


                                                              cGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.g                                        <  1:546559/101‑1 (MQ=255)


                                                               gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gc                                       >  1:2389132/1‑101 (MQ=255)


                                                               gAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gc                                       >  2:1430809/1‑101 (MQ=255)


                                                                aaaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gcc                                      >  1:2537369/1‑101 (MQ=255)


                                                                aaaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.Gcc                                      >  1:636931/1‑101 (MQ=255)


                                                                 aaCCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCg                                     <  1:1037329/101‑1 (MQ=255)


                                                                   cccccTTGCGGATTGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCa                                   <  1:3983094/98‑1 (MQ=255)


                                                                   ccaccTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCa                                   >  2:3412179/1‑101 (MQ=255)


                                                                     accTTGCGGATTGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGt                                 <  2:440112/101‑1 (MQ=255)


                                                                       cTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCg                               <  2:877191/101‑1 (MQ=255)


                                                                         tGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCt                             <  1:1699823/101‑1 (MQ=255)


                                                                         ggCGGATTGCCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCt                             <  2:3358922/100‑1 (MQ=255)


                                                                           cGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcc                           >  1:1327968/1‑101 (MQ=255)


                                                                           cGGATTCTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCATCTGCATGTAGTCGGCG..G.GCAGTTCGC.GCCGCAGTCGCTcc                           >  2:578748/1‑101 (MQ=255)


                                                                             gATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcccc                         <  1:1557197/101‑1 (MQ=255)


                                                                             gATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcccc                         <  2:174846/101‑1 (MQ=255)


                                                                              aTTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTccccc                        >  1:591557/1‑101 (MQ=255)


                                                                               ttGTCCCTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcccccc                       <  1:2132095/101‑1 (MQ=255)


                                                                               ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcccccc                       <  1:4150070/101‑1 (MQ=255)


                                                                               ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcccccc                       <  1:2552502/101‑1 (MQ=255)


                                                                               ttGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTcccccc                       <  2:3398002/101‑1 (MQ=255)


                                                                                       ttCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc               <  2:3874758/101‑1 (MQ=255)


                                                                                       ttCGCGGGGCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGc               <  2:48514/101‑1 (MQ=255)


                                                                                          gcgGGCCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTg            <  2:2611230/101‑1 (MQ=255)


                                                                                           ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg            >  2:3624233/10‑101 (MQ=2)


                                                                                           ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg            >  2:3429367/10‑101 (MQ=2)


                                                                                           ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg            >  1:2920285/10‑101 (MQ=2)


                                                                                           ggtgccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTg            >  1:3257903/10‑101 (MQ=2)


                                                                                           cgGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTgg           >  2:599265/1‑101 (MQ=255)


                                                                                            ggggCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa          <  1:348264/101‑1 (MQ=255)


                                                                                            ggggCGAAGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGa          <  2:3139267/101‑1 (MQ=255)


                                                                                             gggCGAAGCGTCGCCCCCCCCGGGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGAt         <  1:765578/101‑1 (MQ=255)


                                                                                              ggCGAAGCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGGATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATc        <  1:2794140/101‑1 (MQ=255)


                                                                                              gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt         >  2:1021792/7‑101 (MQ=2)


                                                                                              gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt         <  1:3901565/95‑1 (MQ=2)


                                                                                              gccgctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGAt         <  2:2750288/95‑1 (MQ=2)


                                                                                                 gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa     >  1:1270206/1‑101 (MQ=255)


                                                                                                 gAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaa     >  2:22398/1‑101 (MQ=255)


                                                                                                  gtgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATGGCTATGGCGGCAGTGTCA.GGTTTTCCA.GCGGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa     <  1:3235548/99‑1 (MQ=2)


                                                                                                  ctgCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCG..GCGAACACCGATACCGC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa     <  1:4104645/99‑1 (MQ=2)


                                                                                                  aaGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGaac    >  2:1892291/1‑100 (MQ=255)


                                                                                                    gCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACt  >  1:2687011/1‑101 (MQ=255)


CATCTCGGTGCCGTCGCTCGTCCAGCCGGCCTGCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTGCATGTAGTCGGCG..G.GCAGTTCGA.GCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT  >  NC_014034/1395531‑1395731

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG