New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2322522 =154 (0.820)2 (0.010) 2/178 30.9 0.01 coding (2544/2607 nt) RCAP_rcc02155 hypothetical protein
?NC_014034 = 2469779 175 (0.830)coding (289/1008 nt) RCAP_rcc02294 signal transduction histidine kinase
Rejected: Position hash score below cutoff.

Only 100 of 170 total aligned reads displayed.

GTTGCGGCTGCGGCTGATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGCTGC  >  NC_014034/2322422‑2322622
                                                                                                      |                                                                                                    
gTTGTGGCTGCCGCTGATGGGGGGCTATGAGGGCTGATCAGCCCGGGATGTGGCGCAAGAGCCCGCG.CCGA.CCGGCGGCGATCCGCCCCGCCACATCGGcc                                                                                                      >  2:2501284/1‑101 (MQ=255)
 ttGCGGCTGCGGCTGATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCa                                                                                                     >  1:258999/1‑101 (MQ=255)
   ggggctgcgggtgATGCAGGGCTGTGACGCTTGATCACCCGGGGTTGCCCCGAAAGCCCCCGCG.CCGC.CGGCCCGCGATCACCCCCGCCACATCGGCCATc                                                                                                   <  2:535557/99‑1 (MQ=255)
    cggctgcggctgATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCg                                                                                                  >  2:357679/1‑101 (MQ=255)
     ggctgcggctgATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGc                                                                                                 >  2:2070063/1‑101 (MQ=255)
       ctgcggctgATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGcca                                                                                               >  2:2712744/1‑101 (MQ=255)
          cggctgATGCAGGGCTATGACGCCTGATCAGCCCGGGGTGCGCCGCAAGAGCCCGCG.CCGA.ACGGCCGCGATCAGCCCCGCCACATCGGCCATCGccacca                                                                                            >  2:3475295/1‑101 (MQ=255)
            gctgATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATc                                                                                          >  2:2471882/1‑101 (MQ=255)
             gtgATGCGGGGCTATGCCGCCTGACCAGCCGGGGTGGCGCCGCAAGACCCCGCG.CCGC.CCGGCCGCGATCACCCCCGCCACATCGGCCATCGCCACCATCg                                                                                         <  1:490007/100‑1 (MQ=255)
             ctgATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCg                                                                                         >  1:19809/1‑101 (MQ=255)
             cggATGCGGGGCTATGCCGCCTGACCAGCCGGGTTGGCGCCGAAAGCGCCCGCG.CCGC.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCg                                                                                         <  2:1307105/99‑1 (MQ=255)
              tgATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCgg                                                                                        >  1:3424845/1‑101 (MQ=255)
               gATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGc                                                                                       >  1:379143/1‑101 (MQ=255)
                 gggggggCTAGGACGCCTGACCAGCCGGGGTTGCCCCGAAAGACCCCGCG.CGGC.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCga                                                                                     <  1:2749074/97‑1 (MQ=255)
                 ggcggggCTACGCCCCCTGACCCGCCCGGGTTGCGCCGCAAGCGCCCGCG.CCGC.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCga                                                                                     <  2:258954/97‑1 (MQ=255)
                   ggggctgaTGCCGCGTGATCAGCCGGGGTTGCGCCGCAAGACCCCGCG.CCGA.CCGGCCGCGATCACCCCCGCCACATCGGCCATCGCCACCATCGGCgaga                                                                                   <  2:3914266/94‑1 (MQ=255)
                    ggggCTATGCCGCCTGATCCGCCGGGGTTCCCCCGAAAGCCCCCGCC.CCGC.CCGCCCGCGACCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGAc                                                                                  <  1:472656/100‑1 (MQ=255)
                    ggggCTATGCCCCTTGACCAGCCGGGTTGGCCCCGAAAGCCCCCGCG.CGGC.CCGCCCGCGATCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGAc                                                                                  <  2:6234/100‑1 (MQ=255)
                    aGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGAc                                                                                  >  1:1882121/1‑101 (MQ=255)
                    aGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGAc                                                                                  >  1:7042/1‑101 (MQ=255)
                     gggCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACg                                                                                 >  1:1506396/1‑101 (MQ=255)
                      ggCTATGCCCCCGGAACA.CCCGGGTTGCCCCCGAAG.GCCCGCGCCCCACCCGGCGGCGTCCCCCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGc                                                                                <  2:4223674/101‑1 (MQ=255)
                       gCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGcc                                                                               >  1:2354042/1‑101 (MQ=255)
                        cTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCg                                                                              >  1:2312222/1‑101 (MQ=255)
                         tATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCAAATCGGCCATCGCCACCATCGGCGAGACGCCGa                                                                             >  2:1586200/1‑101 (MQ=255)
                          atgcccccTGACCCGCCCGGGTTGCCCCGAAAGCCCCCGCC.CCGC.CCGCCCGCGACCCCCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGAc                                                                            <  1:1688348/95‑1 (MQ=255)
                          atgcccccTGACCACCCGGGGTGCCGCCAAAAACGCCCGCC.CCGC.CCGCCCGCGATCCCCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGAc                                                                            <  2:2595236/95‑1 (MQ=255)
                           tgccGCCTGACCCGCCGGGGTCGCGCCGAAAGCCCCCGCC.CCGC.CCGCCCGCGACCCCCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGAcc                                                                           <  1:1818490/98‑1 (MQ=255)
                           tGACCCGTGATCAGCGCGGTTGGCCCCCCAAGACCCCGCG.CCGC.CCGGCCGCGACCCCCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGAcc                                                                           <  1:1395749/101‑1 (MQ=255)
                            gACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCg                                                                          >  1:782739/1‑101 (MQ=255)
                              cGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGc                                                                        >  2:2991280/1‑101 (MQ=255)
                               gcgtgctCAGCCGGGGTTGCGCTCAAGGCCCCCGCG.CCGA.CCGGCGGGGACCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCa                                                                       <  2:3673737/95‑1 (MQ=255)
                               gCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCa                                                                       >  2:1218039/1‑101 (MQ=255)
                               gCCTGACCACCCGGGGTGGCGCCGAAAGCCCCCGCC.CCGC.CCGGCCGCGATCCGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCa                                                                       <  2:931752/101‑1 (MQ=255)
                               cccTGACCCGCCGGGGTTCCGCCGAAAGACCCCGCC.CCCC.CCGGCCGCGATCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCa                                                                       <  1:2705825/100‑1 (MQ=255)
                                  tGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAggg                                                                    >  2:1318739/1‑101 (MQ=255)
                                    aTCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCg                                                                  >  1:3378335/1‑101 (MQ=255)
                                      ccgCCGGGGTTCCCCCGAAGGCGCCCCCG.CCAC.CCGCCCGCGACCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGAt                                                                <  1:1012484/99‑1 (MQ=255)
                                          cggggGTGCGCCGAAAGCCCCCGCC.CCCC.CCGGCCGCAACCCGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAg                                                            <  2:4000907/99‑1 (MQ=255)
                                          ccGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAg                                                            >  2:2217889/1‑101 (MQ=255)
                                           ggggTTGCGCCGAAAGACCCCGCG.CCGC.CCGGCCGCGATCGCCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAgc                                                           <  1:4212147/100‑1 (MQ=255)
                                             ggTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGGGATGTAgcgc                                                         >  1:1807947/1‑101 (MQ=255)
                                              gTTGCCCCGAAAGCCCCCGCG.CCGC.CGGCCCGCGACCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGcgcg                                                        <  1:1600414/101‑1 (MQ=255)
                                                tGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGgc                                                      >  1:838412/1‑101 (MQ=255)
                                                  cgccacAAGGCCCCGCC.CCGC.CCGCCCGCGCTCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGgccg                                                    <  2:2232138/101‑1 (MQ=255)
                                                   gccgcAAGAGCCCGCG.GCTA.CCGGCCGCGATCAGCCCCGCCACCTCGGCCAATGCCACCATCGGCGAGACGCCGACCGGCAGGGGGGTGAAGCGGgggccg                                                   >  2:1101759/1‑97 (MQ=255)
                                                    ccgcAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGgccgcc                                                  >  1:2243535/1‑101 (MQ=255)
                                                    caaaaaGAGCCCCCG.CCCG.CCTGCCGGCCTCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGgccgcc                                                  <  1:4154408/97‑1 (MQ=255)
                                                      gcAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCAt                                                >  2:3345444/1‑101 (MQ=255)
                                                       cAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCAtt                                               >  2:2373663/1‑101 (MQ=255)
                                                        aagcccccGCG.CCCC.CCGCCCGCAACCCCCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTc                                              <  2:2427256/96‑1 (MQ=255)
                                                        aaGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTc                                              >  2:1015969/1‑101 (MQ=255)
                                                         agagCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTcc                                             >  1:508002/1‑101 (MQ=255)
                                                          gcccccGCG.CCGC.CCGCCCGCCACCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCg                                            <  2:2852483/98‑1 (MQ=255)
                                                          gagCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCg                                            >  1:2470953/1‑101 (MQ=255)
                                                          gagCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCg                                            >  1:4031469/1‑101 (MQ=255)
                                                            gCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCggg                                          >  2:836252/1‑101 (MQ=255)
                                                            gCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCggg                                          >  2:440094/1‑101 (MQ=255)
                                                                  g.cCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAAc                                    >  2:3967842/1‑101 (MQ=255)
                                                                        ccccgCCGCGCTCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTgcg                                <  2:1361552/97‑1 (MQ=255)
                                                                         ccGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTgcgc                               >  1:2508089/1‑101 (MQ=255)
                                                                          cGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGcc                              >  1:3898446/1‑101 (MQ=255)
                                                                           ggCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCt                             >  1:1465254/1‑101 (MQ=255)
                                                                           gccgccgctCACCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCt                             <  2:3184624/93‑1 (MQ=255)
                                                                             ccgcgcccccccccGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTg                           <  1:87838/91‑1 (MQ=255)
                                                                              cgcgATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGCGCCGAACTACGCCTTGt                          >  1:1878786/1‑101 (MQ=255)
                                                                              cgccaccacccccGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGt                          <  1:2769037/92‑1 (MQ=255)
                                                                               cgcaccccccccGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTa                         <  2:49937/93‑1 (MQ=255)
                                                                               ccaaccccccccGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTa                         <  1:1862385/93‑1 (MQ=255)
                                                                                cgATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAg                        >  1:2979475/1‑101 (MQ=255)
                                                                                ccgccccccccGCCACATCGGCCATCGCCCCCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAg                        <  1:1190393/94‑1 (MQ=255)
                                                                                 catcccccccGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAgg                       <  2:3095234/95‑1 (MQ=255)
                                                                                    cAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGgcgc                    >  1:3110269/1‑101 (MQ=255)
                                                                                     caccccGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGgcgcg                   <  1:2140780/99‑1 (MQ=255)
                                                                                     aGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGgcgcg                   >  2:3963412/1‑101 (MQ=255)
                                                                                      gCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGgcgcgc                  >  1:3693135/1‑101 (MQ=255)
                                                                                       ccccGCCACATCGGCCATCGCCCCCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCa                 <  1:1101853/101‑1 (MQ=255)
                                                                                        cccGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAg                >  2:1723064/1‑101 (MQ=255)
                                                                                         cccccccaTCGGCGATCCCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGa               <  2:2007421/95‑1 (MQ=255)
                                                                                           gCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtc             <  1:3199060/101‑1 (MQ=255)
                                                                                           gCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtc             >  2:3671060/1‑101 (MQ=255)
                                                                                           gCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtc             >  2:3559171/1‑101 (MQ=255)
                                                                                            ccgcacgggCCTTCGCCCCCATCGGCGAGGCGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtcg            <  2:1805396/94‑1 (MQ=255)
                                                                                            ccACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtcg            >  1:2522869/1‑101 (MQ=255)
                                                                                            ccACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtcg            >  2:3873728/1‑101 (MQ=255)
                                                                                             cacaTCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCCGAtcgt           >  1:2867067/1‑101 (MQ=255)
                                                                                             cacaTCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtcgt           >  2:1715680/1‑101 (MQ=255)
                                                                                              ccaTCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtcgtc          <  2:3426148/100‑1 (MQ=255)
                                                                                               caTCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGAtcgtcg         <  1:2070201/101‑1 (MQ=255)
                                                                                                aTCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGa        >  2:2297078/1‑101 (MQ=255)
                                                                                                aTCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGa        >  1:2445680/1‑101 (MQ=255)
                                                                                                 gcGGCCATCGCCCCCTTCGGCGAGACGCCGCCCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGaa       <  1:223087/100‑1 (MQ=255)
                                                                                                   ggCGATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCAATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGc     <  1:3475547/101‑1 (MQ=255)
                                                                                                   ggCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGc     <  2:3338238/101‑1 (MQ=255)
                                                                                                    gCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTGGGCGCGCAGATCGTCGAAGCt    <  1:1293884/101‑1 (MQ=255)
                                                                                                    gCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGCt    <  2:2078568/101‑1 (MQ=255)
                                                                                                    gCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGCt    <  1:2472066/101‑1 (MQ=255)
                                                                                                    gCCATCCCCACCACCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGCt    <  1:2537765/101‑1 (MQ=255)
                                                                                                      cATCGCCCCCACCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGCTGc  <  1:3385695/101‑1 (MQ=255)
                                                                                                      cATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGCTGc  <  1:1338345/101‑1 (MQ=255)
                                                                                                      |                                                                                                    
GTTGCGGCTGCGGCTGATGCAGGGCTATGACGCCTGATCAGCCCGGGTTGCGCCGCAAGAGCCCGCG.CCGA.CCGGCCGCGATCAGCCCCGCCACATCGGCCATCGCCACCATCGGCGAGACGCCGACCGGCAGGGCGATGTAGCGCGGCCGCCATTCCGGGCCGAACTGCGCCTTGTAGGCGCGCAGATCGTCGAAGCTGC  >  NC_014034/2322422‑2322622

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG