BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 408473	151 (0.870)	83 (0.480)	38/164	9.6	0.52	intergenic (+91/+57)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 2600949	0 (0.000)	83 (0.480)	38/164	9.6	0.52	intergenic (+11/‑130)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 187 total aligned reads displayed.


CAACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCAA.AGACGGGG..G.....GCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGC  >  NC_014034/408373‑408568


caACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGCCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAg                                                                                                         <  1:4086255/101‑1 (MQ=255)


caACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAg                                                                                                         <  2:343905/101‑1 (MQ=255)


caACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCCGGGTATTTGCGGCAAGATGAAGCCGATGTCCCTCATCTTGCCGCAAATATCCCCGGGGGAg                                                                                                         >  2:218062/1‑101 (MQ=25)


 aaCGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAgg                                                                                                        >  1:3359097/1‑101 (MQ=255)


   cGTCTGAGAGGCTGGGGGCTCTGCCCCCCGACCCCCCGGGTATTTTCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCCGGGGGGGGCt                                                                                                      >  1:1133580/1‑101 (MQ=25)


    gTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCtt                                                                                                     <  2:2312242/101‑1 (MQ=255)


    gTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCtt                                                                                                     <  1:1640521/101‑1 (MQ=255)


       tGAGATGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCt                                                                                                  <  2:687823/101‑1 (MQ=255)


           gggCTGGGGGCTCTGCCCCCAGCCCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGaaa                                                                                              <  1:3083363/100‑1 (MQ=255)


           agGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGaaa                                                                                              <  1:1222971/101‑1 (MQ=255)


           agGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGaaa                                                                                              <  2:249273/101‑1 (MQ=255)


           agGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGaaa                                                                                              >  2:2836478/1‑101 (MQ=255)


              cagggcgCTCTGCCCCCAGACCCCTGGGGAATTTGCGGCAGGATGAAGCCGATGTCCTTCATCTTGCAGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCa                                                                                           <  2:2714523/99‑1 (MQ=25)


                  gggCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCaagac                                                                                       <  2:1844816/101‑4 (MQ=255)


                     ctctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGCGGCTTGCTGAAAGC.A.AGACggg                                                                                  >  2:129794/1‑101 (MQ=255)


                     ctctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACggg                                                                                  >  1:1823383/1‑101 (MQ=255)


                      tctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCaagactggg                                                                                   >  1:3790936/1‑94 (MQ=255)


                       ctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGGTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACggggt                                                                                >  2:1398178/1‑100 (MQ=255)


                       ctGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACgggg..g                                                                              >  2:3364425/1‑101 (MQ=255)


                        tGCCCCCAGACCCCCGGGGTATTTGCGGGAAGAATAAACCGACGTTCCTTATTTTGCCGCCAAAAACCCCGGGGGGGGGTGTCCGAAAAAAA.AAACgggg..g                                                                              >  2:853569/1‑101 (MQ=255)


                        cccccccGGCCCCCGGGGATTTTTGGGGAAAAATAAGGCCGATTTCTTTCATTTTCCCGCAAATTTCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACgggg..g.....g                                                                        <  1:1592805/99‑1 (MQ=255)


                         gCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGCGGCTTGCTGAAAGCaagacagatcgg                                                                                >  2:3028496/1‑91 (MQ=25)


                            cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..G.....Gcaga                                                                    <  1:3679316/101‑4 (MQ=255)


                            cccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..G.....Gcaga                                                                    <  1:1377659/101‑4 (MQ=255)


                             ctaGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..G.....Gcagag                                                                   <  1:3262211/99‑5 (MQ=255)


                             ccAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..G.....Gcagag                                                                   >  2:2967539/1‑97 (MQ=255)


                               aGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAG.AA.AGACGGGG..G.....Gcagagag                                                                 >  2:3261970/1‑95 (MQ=255)


                                gACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGNTTGCTGCAAGC.A.AGACGGGG..G.....Gcagagccc                                                                >  1:2486080/1‑94 (MQ=25)


                                  ccccgGGTATTTTGGCGGAAAAATGAACCCGTTTCCTTTCATCTTCCCAAAAATCCCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..G.....Gcagagccccc                                                              <  1:879360/101‑10 (MQ=255)


                                  cccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..G.....Gcagagccccc                                                              >  1:608292/1‑92 (MQ=25)


                                   ccccGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..G.....Gcagagcccccc                                                             <  1:2092163/101‑11 (MQ=25)


                                                gCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCa                                                     >  2:2067999/1‑101 (MQ=21)


                                                 cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCaa                                                    >  1:4072500/1‑101 (MQ=21)


                                                 cGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCaa                                                    <  2:962094/101‑1 (MQ=21)


                                                   gaaaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCaaaa                                                  <  2:3597311/99‑1 (MQ=21)


                                                   gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCaaaa                                                  <  2:2454172/101‑1 (MQ=21)


                                                   gCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCaaaa                                                  <  2:3675828/101‑1 (MQ=21)


                                                    cAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAg                                                 <  2:3143514/101‑1 (MQ=21)


                                                     aaGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAgg                                                >  1:342787/1‑101 (MQ=21)


                                                      aGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACGGGTCGGCAAAAGga                                               >  1:3656808/1‑101 (MQ=18)


                                                      aGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGga                                               >  1:1390184/1‑101 (MQ=21)


                                                      aGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGga                                               >  1:574909/1‑101 (MQ=21)


                                                      aGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGCCGCCAAAAGga                                               >  2:460123/1‑101 (MQ=18)


                                                       gaggAAGCCGATGTCCTTGATCTTGCCGCAAATAGCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgac                                              <  1:631105/98‑1 (MQ=255)


                                                       gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGGAGAGCCCCCCGCACAGGGCGCCAAAAGgac                                              >  2:1508479/1‑101 (MQ=21)


                                                       gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgac                                              >  2:3771314/1‑101 (MQ=21)


                                                       gATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgac                                              >  1:2759788/1‑101 (MQ=21)


                                                        aTGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgacc                                             >  1:17272/1‑101 (MQ=21)


                                                         tGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgaccg                                            >  1:2826789/1‑101 (MQ=21)


                                                          gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgaccga                                           >  2:2816777/1‑101 (MQ=21)


                                                          gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgaccga                                           <  2:1137507/101‑1 (MQ=21)


                                                          gAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgaccga                                           >  1:2783109/1‑101 (MQ=21)


                                                            aGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgaccgacc                                         >  1:1031664/1‑101 (MQ=21)


                                                            aGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGgaccgacc                                         >  2:1869254/1‑101 (MQ=21)


                                                             gCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCt                                        >  1:1513656/1‑101 (MQ=21)


                                                             gCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCt                                        >  2:2256487/1‑101 (MQ=21)


                                                              ccGATGTCCTTCATTTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCAA.GAAGGGGG..GCAGA.GCCCCCCGCACAGGTCGCCAAAAGGACCGACCTc                                       <  1:4182524/101‑1 (MQ=21)


                                                               cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCa                                      >  1:2055735/1‑101 (MQ=21)


                                                               cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCa                                      >  1:107444/1‑101 (MQ=21)


                                                               cGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCa                                      <  2:3417897/101‑1 (MQ=21)


                                                                gATGTCCTTCATCTTGCGGCAAATTCCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                     <  1:30138/101‑1 (MQ=255)


                                                                gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                     >  1:1212333/1‑101 (MQ=21)


                                                                gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                     <  2:3830015/101‑1 (MQ=21)


                                                                gATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAg                                     <  2:158196/101‑1 (MQ=21)


                                                                 aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                    <  1:2457365/101‑1 (MQ=21)


                                                                 aTGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGa                                    >  2:409701/1‑101 (MQ=21)


                                                                  tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                   <  1:976197/101‑1 (MQ=21)


                                                                  tGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                   >  2:2868143/1‑101 (MQ=21)


                                                                  ggcccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGAt                                   <  2:2485896/98‑1 (MQ=18)


                                                                   gcccTTCATCTGGACGCAAATACCACGGGGGGAGGCTTGCTGAAAGCAAGAGGGGGGGCAGA....GCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATc                                  <  2:1631936/99‑1 (MQ=255)


                                                                    tCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                 <  1:1169721/101‑1 (MQ=21)


                                                                    tCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCa                                 <  1:432479/101‑1 (MQ=21)


                                                                     ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCTACCTCAGATCAg                                >  2:3778110/1‑101 (MQ=18)


                                                                     ccTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAg                                >  1:1998602/1‑101 (MQ=21)


                                                                      cTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGc                               >  1:3803174/1‑101 (MQ=21)


                                                                         cATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                            >  2:2769081/1‑101 (MQ=21)


                                                                         cATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                            >  2:1428358/1‑101 (MQ=21)


                                                                         cATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                            >  2:19976/1‑101 (MQ=21)


                                                                         cATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCg                            >  2:3335189/1‑101 (MQ=21)


                                                                          aTCTTGCGGCAAATATCTCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg                           <  2:2608844/101‑1 (MQ=255)


                                                                          aTCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCgg                           >  2:239789/1‑101 (MQ=21)


                                                                          aTCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAAccccg                           >  1:782389/1‑99 (MQ=21)


                                                                            cTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCg                         <  1:228935/101‑1 (MQ=25)


                                                                               gCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCgtgt                      <  1:223354/101‑1 (MQ=25)


                                                                                ccGCAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGtt                     <  1:3276284/101‑1 (MQ=25)


                                                                                   cAAATATCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCa                  >  2:4108290/1‑101 (MQ=25)


                                                                                      atatCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcg               >  2:3954020/1‑101 (MQ=255)


                                                                                        atCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg             >  1:1271519/1‑101 (MQ=255)


                                                                                        atCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATcgcg             >  1:2619662/1‑101 (MQ=255)


                                                                                         tCCCGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcgg            >  2:3867694/1‑101 (MQ=255)


                                                                                           ccGGGGGGAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCgcggcg          <  2:1799479/101‑1 (MQ=255)


                                                                                             ggggggAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTc        >  1:4003930/1‑101 (MQ=255)


                                                                                              gggggAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGGGTCa       >  2:174247/1‑101 (MQ=255)


                                                                                              gggggAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa       >  2:193211/1‑101 (MQ=255)


                                                                                              gggggAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCa       >  2:2983468/1‑101 (MQ=255)


                                                                                                gggAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAg     >  2:56671/1‑101 (MQ=255)


                                                                                                 ggAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgc    >  1:380876/1‑101 (MQ=255)


                                                                                                  gAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg   >  2:2020580/1‑101 (MQ=255)


                                                                                                  gAGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcg   >  1:3154481/1‑101 (MQ=255)


                                                                                                   aGGCTTGCTGAAAGC.A.AGACGGGG..GGCAGAGCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAgcgc  >  1:893713/1‑101 (MQ=255)


CAACGTCTGAGAGGCTGGGGGCTCTGCCCCCAGACCCCCGGGATATTTGCGGCAAGATGAAGCCGATGTCCTTCATCTTGCCGCAAATATCCCGGGGGGAGGCTTGCTGAAAGCAA.AGACGGGG..G.....GCCCCCCGCACAGGTCGCCAAAAGGACCGACCTCAGATCAGCCCGGCGTGTTGCATCGCGGCGTCAAGCGC  >  NC_014034/408373‑408568

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG