BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1253895 =	51 (0.240)	16 (0.080)	4/198	30.4	0.17	intergenic (+53/+38)	RCAP_rcc01181/hisH	hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
*	?	NC_014034	2577165 =	108 (0.510)	16 (0.080)	4/198	30.4	0.17	intergenic (+87/‑342)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 109 total aligned reads displayed.


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..G..C..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258


 aaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.G...gggg                                                                                                       >  2:1943983/1‑101 (MQ=255)


 aaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...gggg                                                                                                       >  2:2472339/1‑101 (MQ=255)


 aaaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...gggg                                                                                                       <  1:3812968/101‑1 (MQ=255)


  aaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...gggg..g                                                                                                    <  1:3271276/101‑1 (MQ=255)


  aaGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...gggg..g                                                                                                    >  1:4188990/1‑101 (MQ=255)


   aGCAGATCTGACATCTCGATGAAACGGCCGCCTGCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..c                                                                                                 <  1:3670525/101‑1 (MQ=255)


   aGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...gggg..gg                                                                                                   >  1:82244/1‑100 (MQ=255)


    gaaGATCTGACATCGCGATGAACCGGCCGCCTTAGGGCGGGGTTTTCCCTGGGCGCGAAAGCGTTCCGCCTTGGCTTCGCCAAGGCGCCCCGG.C...ggggtct                                                                                                    <  2:1114734/99‑4 (MQ=255)


    gCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ct                                                                                                <  2:3196933/101‑2 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCTTTGGCTTCGCCAAGGCGCCCCGG.C...CGCG..g..c..ag.c                                                                                           >  1:3608823/1‑101 (MQ=255)


      aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctcc                                                                                              <  1:1592978/101‑4 (MQ=255)


       gATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCC...GGGG..g..c..ccc                                                                                            >  1:1252737/1‑99 (MQ=255)


         tCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...gggg..ggggggcc                                                                                             >  1:337062/1‑94 (MQ=255)


         tCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctccgcc                                                                                           <  2:3622582/101‑7 (MQ=255)


         tCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctccgcc                                                                                           <  1:2643866/101‑7 (MQ=255)


          cTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctccgccc                                                                                          <  2:807581/101‑8 (MQ=255)


           tGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..cgccggccc                                                                                         >  1:1874003/1‑93 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctccgccccc                                                                                        <  2:2750766/101‑10 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctccgccccc                                                                                        <  1:4085779/101‑10 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctccgccccc                                                                                        <  2:82220/101‑10 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctcccgcccc                                                                                        >  1:231040/1‑92 (MQ=255)


            gACATCGCGATGAAACGGCCGCCTTCGGCCGGCCTTTTGCCTGGGCGCGAAAGGGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..g..ctccgccccc                                                                                        <  1:4140471/101‑10 (MQ=37)


             aCATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCg                                                                                     <  2:2868042/101‑1 (MQ=255)


               aTCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.Ca                                                                                  <  1:2963820/101‑1 (MQ=255)


                tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CAc                                                                                 <  1:345017/101‑1 (MQ=255)


                tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CAc                                                                                 <  1:3901829/101‑1 (MQ=255)


                tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CAc                                                                                 <  2:1411277/101‑1 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGGGCG..C..CG.C.CCCCC.CAcccccc                                                                            >  2:1574564/1‑100 (MQ=37)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCg                                                                            <  2:3175609/101‑1 (MQ=255)


                     aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCg                                                                            <  1:1810535/101‑1 (MQ=255)


                        aaaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCg                                                                         <  1:2767420/101‑1 (MQ=255)


                        aaaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCC.CCCCCCCCGCg                                                                         >  2:1986676/1‑101 (MQ=37)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.G...GGGG..G..G..GG.CGCCCCGCCAcccccccccc                                                                        >  2:3423326/1‑96 (MQ=255)


                         aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGt                                                                        <  2:1584687/101‑1 (MQ=255)


                            ggCCGCCTTGGGGCGGCTATTTGCCGGGGCGCAAAAGAGTTGCGCCTTGGGTTGGCCGAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CCCCCCCGGCGTAtt                                                                     <  2:3922262/101‑1 (MQ=16)


                            ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTAtt                                                                     <  1:533525/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTAttt                                                                    <  2:3686422/101‑1 (MQ=255)


                             gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTAttt                                                                    <  1:1583490/101‑1 (MQ=255)


                               cgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.CCGGGGGG..G..C..CG.C.CCCCC.CCccccccccccccctt                                                                   >  2:1103319/1‑91 (MQ=255)


                                  cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCAcc                                                               >  2:3685125/1‑101 (MQ=255)


                                   ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCa                                                              <  2:578392/101‑1 (MQ=255)


                                   ttCGGGCGGCCTTTTGCCGGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCa                                                              <  1:3415611/101‑1 (MQ=25)


                                   ttCGGGCGGCCTTTGGCCTGGTCGCGAAAGCGTTTCGCCTTGTCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCa                                                              <  2:1690758/101‑1 (MQ=25)


                                     cGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAgg                                                            <  1:3405231/101‑1 (MQ=255)


                                     cGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAgg                                                            <  1:1590591/101‑1 (MQ=255)


                                       ggcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGaa                                                          <  1:395547/101‑1 (MQ=255)


                                          ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaag                                                       <  2:2969775/101‑1 (MQ=255)


                                             cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagcca                                                    <  2:2854441/101‑1 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  1:3720863/101‑1 (MQ=255)


                                               tttGCCTGGGCGCGAAAGCGTTTCGCCTGGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                  <  2:1199601/101‑1 (MQ=25)


                                                ttGCCTGGGCGCTAAATCGTTTCGCCTTGGCGTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagacaaag                                                 <  1:1396644/101‑1 (MQ=25)


                                                 tGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagc                                                <  2:2841649/101‑1 (MQ=255)


                                                 tGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagc                                                <  2:4188728/101‑1 (MQ=255)


                                                  gCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagcc                                               <  2:1217622/101‑1 (MQ=255)


                                                    cTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGt                                             <  2:8706/101‑1 (MQ=255)


                                                     tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTc                                            <  2:2006358/101‑1 (MQ=255)


                                                         cgcgAAAGCGTTTCGCCTTTGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCg                                        <  2:3242288/101‑1 (MQ=37)


                                                         cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GGCC..CG.C.CCCCC.CACCCCCCGCGGCTTTTCACCAGGAAAAGCCCAAGACGCCCCCg                                        >  2:3456417/1‑101 (MQ=21)


                                                         cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCg                                        <  1:298208/101‑1 (MQ=255)


                                                         cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCg                                        <  1:4114442/101‑1 (MQ=255)


                                                         cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCC.CCCCCCCGGCGGATTTGCCCCAGGAAAAGCCAAAGCCGTCCCCg                                        >  2:3267300/1‑101 (MQ=25)


                                                            gAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GC.C..CGCC.CCCCG.CACCCCCAGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCa                                     >  2:3513663/1‑101 (MQ=37)


                                                              aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                   <  2:1252641/101‑1 (MQ=255)


                                                              aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                   <  2:4148348/101‑1 (MQ=255)


                                                                  gTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCg                               <  2:261641/101‑1 (MQ=255)


                                                                    ttcgtgttGGCTTGGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                             <  2:859801/95‑1 (MQ=25)


                                                                    ttCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                             >  2:2806136/1‑101 (MQ=255)


                                                                    ttCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                             <  1:2316851/101‑1 (MQ=255)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CCCCCCCGGCGGATTTGCACCCGGGAAAGCCAAAGCCGTCCCCCGCCGGACCGaaag                           >  1:1064827/1‑99 (MQ=21)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                           <  1:349525/101‑1 (MQ=255)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                           <  1:2065677/101‑1 (MQ=255)


                                                                      cGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                           <  1:1628487/101‑1 (MQ=255)


                                                                        ccTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGcc                         <  2:130858/101‑1 (MQ=255)


                                                                         cTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCt                        <  2:2687663/101‑1 (MQ=255)


                                                                          ttGGTTTCGCCAAGGCGTGCCGG.C...GGGG..G..CTACG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                       <  1:1014535/101‑1 (MQ=37)


                                                                           tGGCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                      <  2:635082/101‑1 (MQ=255)


                                                                             gCTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                    <  2:4222758/101‑1 (MQ=255)


                                                                              cTTCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGa                   <  2:3646998/101‑1 (MQ=255)


                                                                               ttCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAc                  <  2:3816026/101‑1 (MQ=255)


                                                                                tCGCCATGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                 <  1:4223004/101‑1 (MQ=37)


                                                                                tCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                 <  1:410572/101‑1 (MQ=255)


                                                                                tCGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                 <  1:1167136/101‑1 (MQ=255)


                                                                                 cGCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAccc                <  2:178983/101‑1 (MQ=255)


                                                                                  gCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCCGGAcccc               >  2:2018834/1‑101 (MQ=37)


                                                                                  gCCAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc               <  2:2626810/101‑1 (MQ=255)


                                                                                   ccAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCCGGACCCCg              >  1:1921646/1‑101 (MQ=37)


                                                                                   ccAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg              <  1:932430/101‑1 (MQ=255)


                                                                                   ccAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg              <  2:524029/101‑1 (MQ=255)


                                                                                   ccAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg              <  2:1046124/101‑1 (MQ=255)


                                                                                    cAAGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg             <  1:3070721/101‑1 (MQ=255)


                                                                                     aaGGCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCggg            <  2:1374143/101‑1 (MQ=255)


                                                                                      aGGCGACCCGG.C...GGGG..GCTC..CC.C.CCCCC.CACCCCCCGCGGATTTGCACCAGGAAAAGCCCAAGCCGTCCCCGGCAGGACCGAAGGCCCCCGGACCCCCGGc           >  1:3387121/1‑101 (MQ=255)


                                                                                        gCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGccc         <  1:972619/101‑1 (MQ=255)


                                                                                        gCGACCCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGccc         <  1:2968241/101‑1 (MQ=255)


                                                                                         ggACGCGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGcccc        <  2:2315767/100‑1 (MQ=37)


                                                                                            cccGG.C...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt     <  1:2927452/101‑1 (MQ=255)


                                                                                              cgg.c...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:4132658/101‑1 (MQ=255)


                                                                                              cgg.c...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:3540404/101‑1 (MQ=255)


                                                                                              cgg.c...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTCGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa   <  1:36201/101‑1 (MQ=38)


                                                                                               gg.c...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAt  <  1:2622879/101‑1 (MQ=255)


AAAAGCAGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGG.C...GGGG..G..C..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAT  >  NC_014034/2577065‑2577258

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG