BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1344196	217 (1.130)	2 (0.010)	2/182	31.3	0.01	intergenic (+1188/+479)	RCAP_rcc01264/RCAP_rcc01267	reverse transcriptase/hypothetical protein
*	?	NC_014034	= 3439498	192 (0.910)	2 (0.010)	2/182	31.3	0.01	coding (200/1542 nt)	RCAP_rcc03240	ATPase AAA
Rejected: Position hash score below cutoff.

Only 100 of 215 total aligned reads displayed.


AGCCGCCTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCACCGTGCC  >  NC_014034/3439398‑3439598


ccgatctttGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCa                                                                                                      <  2:1315789/94‑1 (MQ=255)


aGCCGCCTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCa                                                                                                      <  2:2055857/101‑1 (MQ=255)


aGCCGCCTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCa                                                                                                      <  1:2131318/101‑1 (MQ=255)


 gccgccTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAg                                                                                                     <  2:879048/101‑1 (MQ=255)


    gccTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAgcgc                                                                                                  >  2:773020/1‑101 (MQ=255)


    gccTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAgcgc                                                                                                  >  1:105143/1‑101 (MQ=255)


     ccTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGcc                                                                                                 >  2:3855368/1‑101 (MQ=255)


        tGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTg                                                                                              >  2:1220243/1‑101 (MQ=255)


        tGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTg                                                                                              <  1:3720836/101‑1 (MQ=255)


         gTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCGTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGTCGCCCGCGGCCTACAGGGCCTTGt                                                                                             <  2:875694/101‑1 (MQ=255)


         gTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGt                                                                                             >  2:1964384/1‑101 (MQ=255)


         gTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGt                                                                                             >  1:636698/1‑101 (MQ=255)


          ttCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTa                                                                                            <  2:3249066/101‑1 (MQ=255)


          ttCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTa                                                                                            >  2:3463437/1‑101 (MQ=255)


            cgtcgGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTaaa                                                                                          <  1:4198696/101‑1 (MQ=255)


              tcgGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGc                                                                                        <  1:3302325/101‑1 (MQ=255)


                ggCGCGAGGATCGCCAGCCTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTc                                                                                      <  2:1410614/101‑1 (MQ=255)


                   gcgAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGc                                                                                   >  1:264785/1‑101 (MQ=255)


                   gcgAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGc                                                                                   <  1:2993003/101‑1 (MQ=255)


                   gcgAGGATCGCCAGCGTGCCCCGGTCCTTGCGCCGCTTGCCCTCCCAAACGCCCGAACCCCGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGc                                                                                   <  1:1077263/101‑1 (MQ=255)


                        gATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGaa                                                                              >  1:4126104/1‑101 (MQ=255)


                         aTCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAg                                                                             >  2:1616743/1‑101 (MQ=255)


                         aTCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAg                                                                             <  1:791798/101‑1 (MQ=255)


                         aTCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAg                                                                             >  1:2730355/1‑101 (MQ=255)


                            gCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAg                                                                          >  2:2608366/1‑101 (MQ=255)


                            gCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAg                                                                          <  1:2165209/101‑1 (MQ=255)


                             ccAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAgg                                                                         >  2:3128254/1‑101 (MQ=255)


                             ccAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAgg                                                                         <  1:1781068/101‑1 (MQ=255)


                             ccAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAgg                                                                         <  2:3169053/101‑1 (MQ=255)


                              cAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAggg                                                                        >  1:832153/1‑101 (MQ=255)


                              cAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAggg                                                                        >  2:3778411/1‑101 (MQ=255)


                               aGCGTGGGCCTGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGt                                                                       <  1:1387913/101‑1 (MQ=255)


                                gCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTc                                                                      <  1:2885966/101‑1 (MQ=255)


                                 cGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCt                                                                     <  2:2965033/101‑1 (MQ=255)


                                  gTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCtt                                                                    <  1:1316774/101‑1 (MQ=255)


                                  gTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCtt                                                                    <  1:958519/101‑1 (MQ=255)


                                  gTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCtt                                                                    <  1:3770556/101‑1 (MQ=255)


                                  gTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCtt                                                                    <  2:265374/101‑1 (MQ=255)


                                  gTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCtt                                                                    <  2:2811000/101‑1 (MQ=255)


                                   tGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTg                                                                   <  1:1968483/101‑1 (MQ=255)


                                   tGCACCGGTCCTTGGGCCGCTCGCCATCCCAATCGCCCGAATCCAGCTCGACGCCCGTGGCCTCCAGCGCCGTGTAAAGCTCGGCCAGAAGCAGGGTCTTg                                                                   <  2:542827/101‑1 (MQ=255)


                                    gcgcCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGc                                                                  <  2:2974582/101‑1 (MQ=255)


                                    gcgcCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGGCTTGc                                                                  >  2:1896199/1‑101 (MQ=255)


                                      gcCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGccc                                                                >  2:659974/1‑101 (MQ=255)


                                         ggTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCCGGGTCTTGCCCGag                                                             >  1:3129314/1‑101 (MQ=255)


                                         ggTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGag                                                             >  1:2486748/1‑101 (MQ=255)


                                          gTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGagc                                                            <  2:1549332/101‑1 (MQ=255)


                                               tGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGagccagcc                                                       >  1:3506531/1‑101 (MQ=255)


                                                 cgccgcTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCtt                                                     <  1:1063303/101‑1 (MQ=255)


                                                  gccgcTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTg                                                    >  1:1509527/1‑101 (MQ=255)


                                                   ccgcTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGc                                                   <  1:1226251/101‑1 (MQ=255)


                                                     gcTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCg                                                 >  1:23335/1‑101 (MQ=255)


                                                      cTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGa                                                >  2:1298570/1‑101 (MQ=255)


                                                       ttGCCCTCCCGATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCGTTGCCGAt                                               >  1:3654517/1‑101 (MQ=255)


                                                       ttGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGAt                                               <  1:1623574/101‑1 (MQ=255)


                                                        tGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATc                                              >  1:851489/1‑101 (MQ=255)


                                                         gCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCa                                             >  1:29475/1‑101 (MQ=255)


                                                         gCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCa                                             <  2:3288794/101‑1 (MQ=255)


                                                          cccTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCAc                                            <  2:1129204/101‑1 (MQ=255)


                                                            cTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCg                                          <  1:3860806/101‑1 (MQ=255)


                                                            cTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCg                                          <  1:3919101/101‑1 (MQ=255)


                                                             tCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGc                                         >  2:3609866/1‑101 (MQ=255)


                                                              cccAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGcc                                        <  1:3229485/101‑1 (MQ=255)


                                                              cccAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGcc                                        <  2:2098183/101‑1 (MQ=255)


                                                               ccAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCa                                       >  2:2585502/1‑101 (MQ=255)


                                                                 aaTCGCCCGAAACCAGCTCGACGCCCCCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATc                                     <  1:1305549/101‑1 (MQ=255)


                                                                  aTCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCa                                    <  1:3463689/101‑1 (MQ=255)


                                                                     gCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCg                                 >  1:677604/1‑101 (MQ=255)


                                                                      cccGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGa                                <  1:1720023/101‑1 (MQ=255)


                                                                       ccGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAg                               <  1:1134286/101‑1 (MQ=255)


                                                                        cGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAgg                              <  2:105119/101‑1 (MQ=255)


                                                                        cGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAgg                              >  1:3581241/1‑101 (MQ=255)


                                                                          aaaCCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCCCCGCCATCACCGAGGGc                            >  2:3804915/1‑101 (MQ=255)


                                                                          aaaCCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGc                            >  1:2585297/1‑101 (MQ=255)


                                                                          aaaCCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGACAGCCTTGCCGATCACCGCCATCACCGAGGGc                            >  1:1415243/1‑101 (MQ=255)


                                                                              cAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTccc                        >  2:3495261/1‑101 (MQ=255)


                                                                              cAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTccc                        <  1:2766061/101‑1 (MQ=255)


                                                                                gCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCg                      <  2:2486564/101‑1 (MQ=255)


                                                                                 cTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGc                     >  2:2864324/1‑101 (MQ=255)


                                                                                  tCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGcc                    <  2:3962141/101‑1 (MQ=255)


                                                                                   cGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGccc                   >  2:2003974/1‑101 (MQ=255)


                                                                                    gACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCt                  >  1:4206052/1‑101 (MQ=255)


                                                                                    gACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCt                  >  2:2698316/1‑101 (MQ=255)


                                                                                     aCGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTc                 <  2:677527/101‑1 (MQ=255)


                                                                                     aCGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTc                 <  2:3849868/101‑1 (MQ=255)


                                                                                      cGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCg                >  2:1352101/1‑101 (MQ=255)


                                                                                       gCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCgg               <  2:1680251/101‑1 (MQ=255)


                                                                                        cccGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCggg              >  2:2160229/1‑101 (MQ=255)


                                                                                        cccGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTATTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCggg              >  2:3305319/1‑101 (MQ=255)


                                                                                         ccGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGc             >  1:1662633/1‑101 (MQ=255)


                                                                                         ccGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGc             >  2:1528124/1‑101 (MQ=255)


                                                                                           gcgGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCAt           <  2:3527646/101‑1 (MQ=255)


                                                                                            cgGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATc          >  2:3870022/1‑101 (MQ=255)


                                                                                             ggCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCa         <  1:661905/101‑1 (MQ=255)


                                                                                             ggCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCa         >  2:229656/1‑101 (MQ=255)


                                                                                              gCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCAc        >  1:3217031/1‑101 (MQ=255)


                                                                                                cTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCACCg      >  1:2840962/1‑101 (MQ=255)


                                                                                                 tCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCACCgg     >  2:4151191/1‑100 (MQ=255)


                                                                                                   cAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCACCGTGc   >  1:240337/1‑101 (MQ=255)


                                                                                                    aGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCACCGTGcc  <  1:4232458/101‑1 (MQ=255)


AGCCGCCTTGTTCGTCGGCGCGAGGATCGCCAGCGTGCGCCGGTCCTTGCGCCGCTTGCCCTCCCAATCGCCCGAAACCAGCTCGACGCCCGCGGCCTCCAGCGCCTTGTAAAGCTCGGCCAGAAGCAGGGTCTTGCCCGAGCCAGCCTTGCCGATCACCGCCATCACCGAGGGCTCCCCGCCCTCGGGCATCACCGTGCC  >  NC_014034/3439398‑3439598

Base quality scores:


ATCG

< 3 ≤


ATCG

< 21 ≤


ATCG

< 29 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG