BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1395899 =	141 (1.020)	56 (0.410)	8/130	20.1	0.28	intergenic (+711/‑220)	RCAP_rcc01306/RCAP_rcc01307	Cas2 family CRISPR‑associated protein/hypothetical protein
*	?	NC_014034	= 1396401	141 (0.670)	56 (0.410)	8/130	20.1	0.28	coding (283/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 208 total aligned reads displayed.


CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCG  >  NC_014034/1396301‑1396501


cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                                                        >  2:1633110/1‑101 (MQ=255)


 gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                                                       <  2:2240828/101‑1 (MQ=255)


 gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc                                                                                                       <  1:1955114/101‑1 (MQ=255)


  tcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACcg                                                                                                      >  1:4127616/1‑101 (MQ=255)


   cgCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACcgc                                                                                                     >  2:75920/1‑101 (MQ=255)


      tCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGcc                                                                                                  >  2:270365/1‑101 (MQ=255)


       ccccccGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGccc                                                                                                 <  2:3189586/101‑1 (MQ=255)


           ccGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCg                                                                                             <  1:1061038/101‑1 (MQ=255)


              cgGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.t                                                                                         <  2:3366925/101‑1 (MQ=255)


               gggggCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.Tg                                                                                        <  1:745056/101‑1 (MQ=255)


               gggggCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.Tg                                                                                        <  2:3850873/101‑1 (MQ=255)


               gggggCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.Tg                                                                                        <  1:3015089/101‑1 (MQ=255)


                ggggCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGa                                                                                       <  1:4209194/101‑1 (MQ=255)


                 gggCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGAt                                                                                      <  1:4214136/101‑1 (MQ=255)


                  ggCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATg                                                                                     <  1:1785587/101‑1 (MQ=255)


                    cGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGc                                                                                   >  2:1218263/1‑101 (MQ=255)


                     gTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATAGAAACCGCGCCCTGCGGG.TGATGGC.g                                                                                 >  1:3553994/1‑101 (MQ=255)


                      tGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.Ga                                                                                >  1:1700580/1‑101 (MQ=255)


                       ggATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GAc                                                                               <  1:930071/101‑1 (MQ=255)


                        gATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACg                                                                              >  2:4088829/1‑101 (MQ=255)


                        gATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACg                                                                              <  2:2445807/101‑1 (MQ=255)


                         aTCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACgg                                                                             <  2:73975/101‑1 (MQ=255)


                          tCGAAACAAGCAGTGGGGTGAGTGGGCTGACCATACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACggg                                                                            >  1:1402468/1‑101 (MQ=255)


                          tCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACggg                                                                            <  2:3390156/101‑1 (MQ=255)


                           cGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGc                                                                           <  2:203994/101‑1 (MQ=255)


                            gAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGca                                                                          >  2:1031509/1‑101 (MQ=255)


                             aaaCAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGcac                                                                         >  2:2123221/1‑101 (MQ=255)


                             aaaCAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGcac                                                                         >  1:56534/1‑101 (MQ=255)


                             aaaCAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGcac                                                                         <  2:3249303/101‑1 (MQ=255)


                              aaCAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.GGATGGC.GACGGGcacc                                                                        >  1:2887693/1‑101 (MQ=255)


                               aCAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGcacca                                                                       >  2:1410469/1‑101 (MQ=255)


                                cAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGcaccac                                                                      <  1:3124553/101‑1 (MQ=255)


                                cAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGcaccac                                                                      >  1:2817610/1‑101 (MQ=255)


                                    cAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCAcggcg                                                                  <  1:2942181/101‑1 (MQ=255)


                                     aGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCAcggcgg                                                                 >  2:3698653/1‑101 (MQ=255)


                                     aGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCAcggcgg                                                                 >  1:1846679/1‑101 (MQ=255)


                                       tGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTc                                                               <  1:2246139/101‑1 (MQ=255)


                                         gggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGc                                                             >  2:3449336/1‑101 (MQ=255)


                                          ggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCt                                                            <  2:3785302/101‑1 (MQ=255)


                                          ggTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCt                                                            <  2:3514291/101‑1 (MQ=255)


                                                tGGGCTGACCAGACAAACGCTGTCTCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTcccccc                                                      <  1:2732068/101‑1 (MQ=255)


                                                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcgc                                                    <  2:4121810/101‑1 (MQ=255)


                                                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcgc                                                    >  2:1799311/1‑101 (MQ=255)


                                                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcgc                                                    <  2:1700465/101‑1 (MQ=255)


                                                  ggCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCcgc                                                    <  1:3384834/101‑1 (MQ=255)


                                                     tGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCggg                                                 >  1:2560462/1‑101 (MQ=255)


                                                     tGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCggg                                                 >  2:1966293/1‑101 (MQ=255)


                                                     tGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCggg                                                 >  2:2800529/1‑101 (MQ=255)


                                                      gACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCgggg                                                >  2:1953598/1‑101 (MQ=255)


                                                      gACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCgggg                                                <  1:1031256/101‑1 (MQ=255)


                                                       aCCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCggggg                                               >  2:2391217/1‑101 (MQ=255)


                                                       aCCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCggggg                                               >  2:81695/1‑101 (MQ=255)


                                                        ccAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGc                                              <  1:1656800/101‑1 (MQ=255)


                                                            aCAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTgg                                          >  1:1311230/1‑101 (MQ=255)


                                                             cAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGa                                         <  2:2560271/101‑1 (MQ=255)


                                                              aaaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGCAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                        >  2:1373424/1‑101 (MQ=255)


                                                              aaaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                        >  2:1376538/1‑101 (MQ=255)


                                                              aaaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                        >  1:2176436/1‑101 (MQ=255)


                                                               aaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                       >  2:4182409/1‑101 (MQ=255)


                                                               aaCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                       <  1:1501007/101‑1 (MQ=255)


                                                                aCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                      <  1:1373524/101‑1 (MQ=255)


                                                                aCGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.CGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGAGCg                                      >  1:3942220/1‑101 (MQ=255)


                                                                aCGCTGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                      <  2:3480863/101‑1 (MQ=255)


                                                                 cGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGGGTGGATCGa                                     >  1:2120678/1‑101 (MQ=255)


                                                                 cGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                     <  1:4057633/101‑1 (MQ=255)


                                                                  gCTGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                    <  2:2410517/101‑1 (MQ=255)


                                                                   cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                   >  1:3727506/1‑101 (MQ=255)


                                                                   cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                   <  1:3710715/101‑1 (MQ=255)


                                                                   cTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                   <  1:2099921/101‑1 (MQ=255)


                                                                    tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                  >  2:4010307/1‑101 (MQ=255)


                                                                    tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                  <  1:134649/101‑1 (MQ=255)


                                                                    cgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCGGCGCGGGCCTATGGCTGACGG..ACC.CGCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAct                                 <  1:1248864/100‑2 (MQ=2)


                                                                     gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.GGATGGC.GCCGGGCACCACGGCGGCCGCTCCCCCCGCGGGGGCGGGGATCGAAACg                                 >  2:67540/1‑101 (MQ=37)


                                                                        gCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGAc                              >  2:250174/1‑101 (MQ=255)


                                                                         cTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGAcc                             <  2:873510/101‑1 (MQ=255)


                                                                          tCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCt                            >  1:3252312/1‑101 (MQ=255)


                                                                           ccccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTg                           <  2:3553741/101‑1 (MQ=255)


                                                                            cccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGa                          >  1:1889704/1‑101 (MQ=255)


                                                                             ccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGaa                         <  1:1015004/101‑1 (MQ=255)


                                                                             ccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGaa                         >  1:1521778/1‑101 (MQ=255)


                                                                             ccccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGaa                         <  1:781792/101‑1 (MQ=255)


                                                                               ccGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAAt                       <  1:4010567/101‑1 (MQ=255)


                                                                                   gggggCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcg                   >  1:3530472/1‑101 (MQ=255)


                                                                                   gggggCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcg                   <  2:3021040/101‑1 (MQ=255)


                                                                                   gggggCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcg                   <  2:1352469/101‑1 (MQ=255)


                                                                                   gggggCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTACCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcg                   >  1:433325/1‑101 (MQ=255)


                                                                                    ggggCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcgc                  <  2:2887474/101‑1 (MQ=255)


                                                                                    ggggCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCcgc                  >  1:1202031/1‑101 (MQ=255)


                                                                                        cGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGa              <  1:2428197/101‑1 (MQ=255)


                                                                                        cGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGa              <  2:430554/101‑1 (MQ=255)


                                                                                         gTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaa             >  1:3788082/1‑101 (MQ=255)


                                                                                         gTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaa             <  2:2820795/101‑1 (MQ=255)


                                                                                          tcgATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGaaa            <  2:3355306/99‑1 (MQ=255)


                                                                                            gATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAAcg          <  1:1550113/101‑1 (MQ=255)


                                                                                               cGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcgg       >  2:1825414/1‑101 (MQ=255)


                                                                                               cGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcgg       >  1:2652948/1‑101 (MQ=255)


                                                                                                gAAACCGCGCCCTGCGGG.GGATGGC.GACGGGCCCCACGGCGGACGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTGCGCGGGAAACgcggc      >  2:1887577/1‑101 (MQ=38)


                                                                                                 aaaCCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcg     >  2:593404/1‑101 (MQ=255)


                                                                                                 aaaCCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcg     <  2:625443/101‑1 (MQ=255)


                                                                                                    ccGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACgcggcggcg  <  2:3643817/101‑1 (MQ=255)


CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAGCAGTGGGGTGAGTGGGCTGACCAGACAAACGCTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGCGCCCTGCGGG.TGATGGC.GACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGACCTGAAATTCCGCGGGAAACGCGGCGGCG  >  NC_014034/1396301‑1396501

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG