| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 1478517 = | 187 (0.960) | 13 (0.070) | 3/184 | 30.3 | 0.08 | intergenic (+5/+138) | RCAP_rcc01372/RCAP_rcc01373 | ABC transporter ATP‑binding protein/RpiR family transcriptional regulator |
| ? | NC_014034 | 1640014 = | 102 (0.480) | intergenic (+94/‑51) | mccB/mccA | methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
Only 100 of 113 total aligned reads displayed.
TGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGG.....G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGT > NC_014034/1639916‑1640114
|
tgtgACTTTCGATGCCTCCGGCGGGGGTATTT.GGGGGCAGATAGAA.CACATCCCTTT.TCTCTTGCCCCCAACATCCCCGGGGGGCC..G..GGGG.....G.....CG...g..cgcccc > 2:2288896/1‑100 (MQ=255)
aTGCCTCCGGCGGGGATATTT.GGGGCAAGATGAAA.CCCCTCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGG.....GGGGN.CG...C..CCCCCGCCACTTcc > 2:509320/1‑101 (MQ=21)
cTCGGGCGGGTTTTTTG.GGGCCAAGAT.AAA.CCCACCCCTTT.TCTTCTGCCCCAAATTC.CCCGGGGGGGCGGG..GGGG.....G.....CGGCCC..CCCCCGCCACTTCCGCCa < 2:1802052/101‑1 (MQ=255)
ccggggggggGTATTTGGGGGAAAGAAAAAC.CCCCCCCCTTT.CACCCTGCCCCAAATTC.CCCGGGGGGCC..G..GGGG.....GGC...CGCCCC..CCCCCGCCACTTCCGcc < 2:1296645/95‑1 (MQ=255)
ggcggGGATATTT.TGGGCAAGATGAAA.ACCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..CCGGGGGCA...G.....CG...C..CCCCCCCCCCTTCCGCCACggg > 2:1750600/1‑101 (MQ=18)
cggGGATATTT.GGGGCAAGATGAAA.CCGATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGc > 2:1271544/1‑101 (MQ=21)
ggggATATTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGNA.G.....CN...C..CCCCCGCCACTTCCGCCACGGGGCa > 1:4222481/1‑101 (MQ=21)
ggggATATTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCa > 1:1193964/1‑101 (MQ=25)
ggggATATTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCa > 1:4156993/1‑101 (MQ=25)
gggaatttt.GGGGAAAAAATAAACCCCACCCTTTT.CATCTTCCCCAAAATA..CCCGGGGGGCC..C..GGGG.....GGC...CGCCCC..CCCCCGCCACTTCCGCCACGGGGCa < 2:2504854/95‑1 (MQ=2)
ggATATTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAgc > 1:2318810/1‑101 (MQ=21)
gATATTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCAccgatctgaa > 2:2711613/1‑92 (MQ=18)
atatTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCAGCCACGGGGCAgcgc > 2:818114/1‑101 (MQ=21)
atatTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGG.....GGC...CG...CGACCCCCGCCACTTCCGCCACGGGGCAgcgc > 2:1038688/1‑101 (MQ=21)
tgggggCAAGA.AAAA.CCCCCCCCTTT.CCCCCTCCCCCAAAATC.CCCGGGGGGCC..C..GGGG.....GGC...CGGCCC..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg < 2:3862991/99‑1 (MQ=255)
tgggcgaaaGATAAAC.CCCACCCCTTT.CATCTCGCCCAAAATA..CCCGGGGGGCC..CGGGGGG.....G.....CGGCCC..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg < 2:1207293/94‑1 (MQ=12)
t.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg > 1:729171/1‑101 (MQ=25)
t.GGGGCAAAGAGAAA.CCCCCCCCTTTCCCTCTTCCCCCAAATA..CCCGGGGGGCC..C..GGGGGGGCAG.....CC...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCg < 2:1223608/101‑1 (MQ=255)
gggggAAAGATAAAC.CCCACCCTTTT.CATCTGCCCCAAAAGAC.CGGGGGGGGCG..G..GGGG.....GGCCC.CC...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg < 2:3308683/100‑1 (MQ=255)
ggggCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc > 1:979752/1‑101 (MQ=25)
ggaaaaagAAC.CCCCTCCCTTT.TCTTTTCCCCCAAAATT.CCGGGGGGGCC..C..GGGG.....GGGCCCCC...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCg < 1:3154015/94‑1 (MQ=255)
cAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt > 1:3714772/1‑101 (MQ=21)
cAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGtt > 1:3197070/1‑101 (MQ=25)
aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGTCAGCGCCCCGGCCGTTg > 2:3801608/1‑101 (MQ=21)
aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg > 2:3148872/1‑101 (MQ=25)
aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg > 2:476050/1‑101 (MQ=25)
aaGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg > 1:3512785/1‑101 (MQ=25)
aGATGAAA.CCCATCCCTTT.CATCTTTCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGa > 1:696071/1‑101 (MQ=21)
aTGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg > 1:2055857/1‑101 (MQ=21)
tGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa > 1:229503/1‑101 (MQ=25)
tGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGa > 1:1327950/1‑101 (MQ=25)
agcaa.CCCCTCCCTTT.CCCTTTCCCCCAAAAGA.CCCGGGGGGCCGGG..GGGG.....G.....CGCCCC..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg < 1:2520481/98‑1 (MQ=255)
gAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa > 2:105336/1‑101 (MQ=25)
gAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa > 1:2494886/1‑101 (MQ=25)
aa.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg > 1:96620/1‑101 (MQ=25)
a.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGga > 2:3396684/1‑101 (MQ=25)
cccATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag > 1:4188376/1‑101 (MQ=25)
cATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc > 2:1430903/1‑101 (MQ=25)
cccctttt.CCTCTTCCCCCAAATCC.CCGGGGGGGCC..G..GGGG.....GCCCC.CC...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc < 1:1254920/96‑1 (MQ=255)
aTCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc > 1:1408632/1‑101 (MQ=25)
tCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg > 1:2684234/1‑101 (MQ=25)
tCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcg > 1:1624093/1‑101 (MQ=25)
ccccTTT.CCCCCTCCCCAAAATCT.CCCGGGGGGCC..C..GGGG.....GGGCCCCC...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAcc < 1:218398/100‑1 (MQ=255)
cccTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgc > 1:478407/1‑101 (MQ=25)
ccTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg > 2:4164487/1‑101 (MQ=25)
cTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGa > 1:2484647/1‑101 (MQ=25)
ttt.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt > 1:2824194/1‑101 (MQ=25)
tt.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg > 2:3563178/1‑101 (MQ=25)
tt.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg > 1:1091080/1‑101 (MQ=25)
t.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt > 1:1838639/1‑101 (MQ=25)
t.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt > 1:2241139/1‑101 (MQ=25)
tccccccccccAAAATT.CCGGGGGGGCC..C..GGGG.....GGCC..CGCC.C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt < 1:2660119/94‑1 (MQ=255)
cATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATggt > 1:980072/1‑99 (MQ=25)
cATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt > 2:1963307/1‑101 (MQ=25)
cATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt > 2:1814031/1‑101 (MQ=25)
cATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt > 1:204490/1‑101 (MQ=25)
aTCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt > 1:3487541/1‑101 (MQ=25)
tCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc > 2:4220085/1‑101 (MQ=25)
tCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTc > 2:3738016/1‑101 (MQ=25)
cTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCTCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa > 1:3643864/1‑101 (MQ=25)
cTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGAGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa > 2:1398167/1‑101 (MQ=25)
ccccAAATAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAg > 2:1861649/1‑101 (MQ=25)
aaaTAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc > 2:3708778/1‑101 (MQ=25)
aaTAT.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt > 1:2303192/1‑101 (MQ=25)
atat.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg > 1:2178667/1‑101 (MQ=37)
atat.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTg > 2:47642/1‑101 (MQ=37)
tat.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGTCGAAGGAGACCGCGATGTTTCAAAAGATCCTGa > 1:3677459/1‑101 (MQ=25)
at.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt > 1:4056427/1‑101 (MQ=37)
at.CCCGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt > 2:2341522/1‑101 (MQ=37)
nccGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCNGATcn > 1:963020/2‑100 (MQ=37)
ccGGGGGGCC..C..GGGGGGCA.G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCNGTTGACGAAGGNGACCGCGATGTNTCAAAAGATCCTGATCGc > 1:247721/1‑101 (MQ=37)
ccggggggcag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGc > 1:3313296/11‑101 (MQ=255)
cggggggcag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGcc > 2:1975314/10‑101 (MQ=255)
ggggggcag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGGCg > 2:3565146/9‑101 (MQ=255)
ggggggcag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCg > 2:4049892/9‑101 (MQ=255)
gggcag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCgaga > 2:2053851/6‑101 (MQ=255)
cag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg > 2:306223/3‑101 (MQ=255)
ag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc > 2:4070547/2‑101 (MQ=255)
ag.....cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc > 1:2273980/2‑101 (MQ=255)
gccgcccc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt < 2:1066186/94‑1 (MQ=255)
gcccgccc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGAt < 2:2546225/94‑1 (MQ=255)
ccccccc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATc < 2:2601584/95‑1 (MQ=255)
cg...c..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAAGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGcgt > 2:4206610/1‑99 (MQ=255)
cccccc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTCTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg < 2:1854003/96‑1 (MQ=255)
cacccc..cccccGCCTCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCg < 2:3469544/96‑1 (MQ=255)
cccac..ccccgGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGc < 2:2823975/97‑1 (MQ=255)
cc..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGACACCGCGATGTTTCAAAAGATCCTGATCTCCAACAGGGCCGAGATCGCCTg < 2:4156731/100‑1 (MQ=255)
c..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt > 1:1538952/1‑101 (MQ=255)
c..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt > 1:1289056/1‑101 (MQ=255)
c..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt < 1:926952/101‑1 (MQ=255)
c..cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGt < 2:3512532/101‑1 (MQ=255)
cctccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTg < 2:1808538/98‑1 (MQ=255)
cccccGCCCCTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCAAGATCGCCTGTc < 1:2289064/101‑1 (MQ=255)
cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc > 1:3576583/1‑101 (MQ=255)
cccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTc < 2:66469/101‑1 (MQ=255)
ccccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTgaga > 1:1808657/1‑98 (MQ=255)
ccccGCCACGTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCg < 2:1384425/101‑1 (MQ=255)
ccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCggg > 1:3484892/1‑101 (MQ=255)
ccGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCggg > 1:3986817/1‑101 (MQ=255)
cGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGt < 1:1123505/101‑1 (MQ=255)
|
TGTGACTTTCGATGCCTCCGGCGGGGATATTT.GGGGCAAGATGAAA.CCCATCCCTTT.CATCTTGCCCCAAATAT.CCCGGGGGGCC..C..GGGG.....G.....CG...C..CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGCCAACAGGGCCGAGATCGCCTGTCGGGT > NC_014034/1639916‑1640114
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|