BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2330179 =	41 (0.250)	12 (0.070)	4/154	26.4	0.16	intergenic (+154/+158)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
*	?	NC_014034	= 2577171	83 (0.390)	12 (0.070)	4/154	26.4	0.16	intergenic (+93/‑336)	fdx/purU	ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

Only 100 of 103 total aligned reads displayed.


AGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..G..C..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAAT  >  NC_014034/2577071‑2577270


aGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCTTTGGCTTCGCCAAGGCGCCCCGGC...CGCG..g..c..ag.c                                                                                                       >  1:3608823/1‑101 (MQ=255)


       aCATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCg                                                                                                 <  2:2868042/101‑1 (MQ=255)


         aTCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.Ca                                                                                              <  1:2963820/101‑1 (MQ=255)


          tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CAc                                                                                             <  1:345017/101‑1 (MQ=255)


          tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CAc                                                                                             <  1:3901829/101‑1 (MQ=255)


          tCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CAc                                                                                             <  2:1411277/101‑1 (MQ=255)


              gATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGG...CGGG..G..G..GG.G.CGCCG.CCccccccc                                                                                       >  1:4223020/1‑99 (MQ=255)


               aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGGGCG..C..CG.C.CCCCC.CAcccccc                                                                                        >  2:1574564/1‑100 (MQ=37)


               aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCg                                                                                        <  2:3175609/101‑1 (MQ=255)


               aTGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCg                                                                                        <  1:1810535/101‑1 (MQ=255)


                  aaaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCg                                                                                     <  1:2767420/101‑1 (MQ=255)


                  aaaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCC.CCCCCCCCGCg                                                                                     >  2:1986676/1‑101 (MQ=37)


                   aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGG...GGGG..G..G..GG.CGCCCCGCCAcccccccccc                                                                                    >  2:3423326/1‑96 (MQ=255)


                   aaCGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGt                                                                                    <  2:1584687/101‑1 (MQ=255)


                      ggCCGCCTTGGGGCGGCTATTTGCCGGGGCGCAAAAGAGTTGCGCCTTGGGTTGGCCGAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CCCCCCCGGCGTAtt                                                                                 <  2:3922262/101‑1 (MQ=16)


                      ggCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTAtt                                                                                 <  1:533525/101‑1 (MQ=255)


                       gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTAttt                                                                                <  2:3686422/101‑1 (MQ=255)


                       gccgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTAttt                                                                                <  1:1583490/101‑1 (MQ=255)


                         cgccTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGCCGGGGGG..G..C..CG.C.CCCCC.CCccccccccccccctt                                                                               >  2:1103319/1‑91 (MQ=255)


                            cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GGTC..CG.C.CCCCC.CCCCCCCGGCGGATTTGCAcc                                                                           >  2:1327570/1‑101 (MQ=38)


                            cTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCAcc                                                                           >  2:3685125/1‑101 (MQ=255)


                             ttCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCa                                                                          <  2:578392/101‑1 (MQ=255)


                             ttCGGGCGGCCTTTTGCCGGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCa                                                                          <  1:3415611/101‑1 (MQ=25)


                             ttCGGGCGGCCTTTGGCCTGGTCGCGAAAGCGTTTCGCCTTGTCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCa                                                                          <  2:1690758/101‑1 (MQ=25)


                               cGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAgg                                                                        <  1:1590591/101‑1 (MQ=255)


                               cGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAgg                                                                        <  1:3405231/101‑1 (MQ=255)


                                 ggcggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGaa                                                                      <  1:395547/101‑1 (MQ=255)


                                    ggcCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaag                                                                   <  2:2969775/101‑1 (MQ=255)


                                       cTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagcca                                                                <  2:2854441/101‑1 (MQ=255)


                                         tttGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                              <  1:3720863/101‑1 (MQ=255)


                                         tttGCCTGGGCGCGAAAGCGTTTCGCCTGGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaa                                                              <  2:1199601/101‑1 (MQ=25)


                                          ttGCCTGGGCGCTAAATCGTTTCGCCTTGGCGTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagacaaag                                                             <  1:1396644/101‑1 (MQ=25)


                                           tGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagc                                                            <  2:2841649/101‑1 (MQ=255)


                                           tGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagc                                                            <  2:4188728/101‑1 (MQ=255)


                                            gCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAaaagccaaagcc                                                           <  2:1217622/101‑1 (MQ=255)


                                              cTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGt                                                         <  2:8706/101‑1 (MQ=255)


                                               tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTc                                                        <  1:3149898/101‑1 (MQ=255)


                                               tGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTc                                                        <  2:2006358/101‑1 (MQ=255)


                                                   cgcgAAAGCGTTTCGCCTTTGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCg                                                    <  2:3242288/101‑1 (MQ=37)


                                                   cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GGCC..CG.C.CCCCC.CACCCCCCGCGGCTTTTCACCAGGAAAAGCCCAAGACGCCCCCg                                                    >  2:3456417/1‑101 (MQ=21)


                                                   cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCg                                                    <  1:4114442/101‑1 (MQ=255)


                                                   cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCg                                                    <  1:298208/101‑1 (MQ=255)


                                                   cgcgAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCC.CCCCCCCGGCGGATTTGCCCCAGGAAAAGCCAAAGCCGTCCCCg                                                    >  2:3267300/1‑101 (MQ=25)


                                                      gAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GC.C..CGCC.CCCCG.CACCCCCAGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCa                                                 >  2:3513663/1‑101 (MQ=37)


                                                        aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                               <  2:4148348/101‑1 (MQ=255)


                                                        aaGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAgg                                               <  2:1252641/101‑1 (MQ=255)


                                                            gTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCg                                           <  2:261641/101‑1 (MQ=255)


                                                              ttcgtgttGGCTTGGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                                         <  2:859801/95‑1 (MQ=25)


                                                              ttCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                                         >  2:2806136/1‑101 (MQ=255)


                                                              ttCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGaa                                         <  1:2316851/101‑1 (MQ=255)


                                                               tCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAg                                        <  1:1944109/101‑1 (MQ=255)


                                                                cGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CCCCCCCGGCGGATTTGCACCCGGGAAAGCCAAAGCCGTCCCCCGCCGGACCGaaag                                       >  1:1064827/1‑99 (MQ=21)


                                                                cGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                                       <  1:1628487/101‑1 (MQ=255)


                                                                cGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                                       <  1:2065677/101‑1 (MQ=255)


                                                                cGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAgg                                       <  1:349525/101‑1 (MQ=255)


                                                                  ccTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGcc                                     <  2:130858/101‑1 (MQ=255)


                                                                   cTTGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCt                                    <  2:2687663/101‑1 (MQ=255)


                                                                    ttGGTTTCGCCAAGGCGTGCCGGC...GGGG..G..CTACG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTc                                   <  1:1014535/101‑1 (MQ=37)


                                                                     tGGCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCa                                  <  2:635082/101‑1 (MQ=255)


                                                                       gCTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAgg                                <  2:4222758/101‑1 (MQ=255)


                                                                        cTTCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGa                               <  2:3646998/101‑1 (MQ=255)


                                                                         ttCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAc                              <  2:3816026/101‑1 (MQ=255)


                                                                          tCGCCATGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                             <  1:4223004/101‑1 (MQ=37)


                                                                          tCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                             <  1:1167136/101‑1 (MQ=255)


                                                                          tCGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcc                             <  1:410572/101‑1 (MQ=255)


                                                                           cGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAccc                            <  2:178983/101‑1 (MQ=255)


                                                                           cGCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAccc                            <  2:237732/101‑1 (MQ=255)


                                                                            gCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCCGGAcccc                           >  2:2018834/1‑101 (MQ=37)


                                                                            gCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc                           <  2:3903775/101‑1 (MQ=255)


                                                                            gCCAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGAcccc                           <  2:2626810/101‑1 (MQ=255)


                                                                             ccAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCCGGACCCCg                          >  1:1921646/1‑101 (MQ=37)


                                                                             ccAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg                          <  2:524029/101‑1 (MQ=255)


                                                                             ccAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg                          <  2:1046124/101‑1 (MQ=255)


                                                                             ccAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCg                          <  1:932430/101‑1 (MQ=255)


                                                                              cAAGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCgg                         <  1:3070721/101‑1 (MQ=255)


                                                                               aaGGCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCggg                        <  2:1374143/101‑1 (MQ=255)


                                                                                aGGCGACCCGGC...GGGG..GCTC..CC.C.CCCCC.CACCCCCCGCGGATTTGCACCAGGAAAAGCCCAAGCCGTCCCCGGCAGGACCGAAGGCCCCCGGACCCCCGGc                       >  1:3387121/1‑101 (MQ=255)


                                                                                  gCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGccc                     <  1:972619/101‑1 (MQ=255)


                                                                                  gCGACCCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGccc                     <  1:2968241/101‑1 (MQ=255)


                                                                                   ggACGCGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGcccc                    <  2:2315767/100‑1 (MQ=37)


                                                                                      cccGGC...GGGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCttt                 <  1:2927452/101‑1 (MQ=255)


                                                                                        cggc...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa               <  1:4132658/101‑1 (MQ=255)


                                                                                        cggc...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa               <  1:3540404/101‑1 (MQ=255)


                                                                                        cggc...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTCGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTa               <  1:36201/101‑1 (MQ=38)


                                                                                         ggc...ggGG..GCTC..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTAt              <  1:2622879/101‑1 (MQ=255)


                                                                                                cgggggctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCt            >  1:3965990/9‑101 (MQ=255)


                                                                                                cgggggctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCt            <  1:3948109/93‑1 (MQ=255)


                                                                                                 gggggctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCtt           >  1:1534710/8‑101 (MQ=255)


                                                                                                   gggctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCCGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGc         >  1:4184108/6‑101 (MQ=255)


                                                                                                   gggctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGc         <  1:233412/96‑1 (MQ=255)


                                                                                                    ggctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGcc        >  1:1659683/5‑101 (MQ=255)


                                                                                                    ggctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGcc        <  1:4181719/97‑1 (MQ=255)


                                                                                                     gctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGccc       <  1:3423571/98‑1 (MQ=255)


                                                                                                      ctc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCa      >  1:2304825/3‑101 (MQ=255)


                                                                                                       tc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaa     >  1:4196194/2‑101 (MQ=255)


                                                                                                       tc..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaa     >  2:2431253/2‑101 (MQ=255)


                                                                                                        c..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaaa    <  2:337011/101‑1 (MQ=255)


                                                                                                        c..cg.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCaaa    >  2:2825984/1‑101 (MQ=255)


                                                                                                            g.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGCAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAat  >  2:1032220/1‑101 (MQ=255)


                                                                                                            g.c.cCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAat  >  1:1395861/1‑101 (MQ=255)


AGATCTGACATCGCGATGAAACGGCCGCCTTCGGGCGGCCTTTTGCCTGGGCGCGAAAGCGTTTCGCCTTGGCTTCGCCAAGGCGACCCGGC...GGGG..G..C..CG.C.CCCCG.CACCCCCGGCGTATTTGCACCAGGAAAAGCCAAAGCCGTCCCCGGCAGGACCGAAGGCCTCAGGACCCCGGGCCCCTTTTATCTTGCCCAAAAT  >  NC_014034/2577071‑2577270

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG