| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,814 | G→T | 5.0% | intergenic (+626/‑305) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,814 | 0 | G→T | 5.0% | 19.0 ‑0.6 ‑0.3 | 200 | intergenic (+626/‑305) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (6/4): ref base (93/96): total (99/101) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.37e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.62e-01 | ||||||||||
Only 100 of 211 total aligned reads displayed.
GGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGG > NC_014034/1395714‑1395914
|
gggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGt > 2:2927724/1‑101 (MQ=255)
ggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTg > 2:1230011/1‑101 (MQ=255)
ggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTg > 2:2973250/1‑101 (MQ=255)
ggCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTg > 2:3783139/1‑101 (MQ=255)
gTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATa < 1:344289/101‑1 (MQ=255)
tGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAg > 1:1457845/1‑101 (MQ=255)
aTCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.g < 2:636854/101‑1 (MQ=255)
aTCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.g > 1:2725732/1‑101 (MQ=255)
tCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gc > 1:3191098/1‑101 (MQ=255)
tCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gc < 1:1892411/101‑1 (MQ=255)
tCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gc < 1:129554/101‑1 (MQ=255)
tCGAAACCTGTTTGGGTCTGGGGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gc < 1:2756509/101‑1 (MQ=37)
cGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gcc > 1:1645150/1‑101 (MQ=255)
cGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gcc > 1:368324/1‑101 (MQ=255)
cGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.Gcc < 1:952804/101‑1 (MQ=255)
gAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCg > 1:2516226/1‑101 (MQ=255)
aaaCTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGt < 1:1737144/101‑1 (MQ=255)
aaaCTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGt > 2:2835321/1‑101 (MQ=255)
aCTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGTCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTgg < 2:1403057/101‑1 (MQ=255)
cTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGa > 2:3592223/1‑101 (MQ=255)
cTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGa < 1:22412/101‑1 (MQ=255)
ggTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.Cg < 1:1561851/101‑1 (MQ=255)
tATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTc < 2:2737455/101‑1 (MQ=255)
tATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTc < 2:3468872/101‑1 (MQ=255)
aTGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCg < 1:1187743/101‑1 (MQ=255)
aTGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCg < 2:275254/101‑1 (MQ=255)
ggATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCt > 1:1877823/1‑101 (MQ=255)
aTCTGGCGCAAACGGAAAGTCTGTCGTCTCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcc > 1:1244178/1‑101 (MQ=255)
aTCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcc > 2:1937197/1‑101 (MQ=255)
cTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcccc < 1:875371/101‑1 (MQ=255)
cTGGCGCAAACGGAAAGTCTGTCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcccc < 1:1424778/101‑1 (MQ=255)
tGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTccccc < 1:616763/101‑1 (MQ=255)
tGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTccccc > 2:3401966/1‑101 (MQ=255)
ggCGCAAACGGAAAGTCTGTTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcccccc < 1:3389196/101‑1 (MQ=255)
ggCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTcccccc > 1:170315/1‑101 (MQ=255)
cgcAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCcgc < 2:1592295/101‑1 (MQ=255)
cgcAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCcgc > 1:1110315/1‑101 (MQ=255)
gcAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCcgcg > 1:3468910/1‑101 (MQ=255)
cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg > 1:2032776/1‑101 (MQ=255)
cAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgg > 2:3023044/1‑101 (MQ=255)
aaaCGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCggg > 1:4078910/1‑101 (MQ=255)
aaCGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCgggg > 2:2340408/1‑101 (MQ=255)
cGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGc > 1:2588767/1‑101 (MQ=255)
cGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGc < 1:2329090/101‑1 (MQ=255)
gAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCgg > 2:691232/1‑100 (MQ=255)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt > 2:1325824/10‑101 (MQ=0)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA..CTGCGTGCGCGCCATG.AATTCATCGAGC.GCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt > 1:1044080/10‑101 (MQ=0)
aaaGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTg < 2:919787/101‑1 (MQ=255)
aaGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTgg < 1:298741/101‑1 (MQ=255)
aaGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTgg > 2:2266842/1‑101 (MQ=255)
aGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCCTGGa > 1:2335903/1‑101 (MQ=255)
gTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGAt > 1:3853416/1‑101 (MQ=255)
tCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:3213383/1‑101 (MQ=255)
cTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:3122353/1‑101 (MQ=255)
cTGTCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:901282/101‑1 (MQ=255)
tGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:1345908/101‑1 (MQ=255)
tGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:7077/101‑1 (MQ=255)
tcgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:2453383/1‑101 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:772701/101‑1 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg > 1:3410438/1‑101 (MQ=255)
tcgCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTg > 1:2397009/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGGGGA.GGTCGCTCCCCCCCCGGGGGGGTGGATCGAAACGgcg > 1:517506/1‑101 (MQ=37)
ccccccGCGGGGGCGTGGATCGAAACAATGCG.GCGCGA...GCCTATGGCTGA.CGGACCCGCC.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTgcgtgcg < 1:3571313/101‑5 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGcgccg < 1:3422787/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt > 1:2128666/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCt > 2:1256389/1‑101 (MQ=255)
ccGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTa > 1:2000319/1‑101 (MQ=255)
ccGCGGGGACGTGGCTCGAAAC.CTGCG.GCGTGATTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTa < 1:3654887/101‑1 (MQ=255)
cttccgatcttGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTAt < 1:3092116/91‑1 (MQ=255)
gggggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGc > 1:1437502/1‑101 (MQ=255)
gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt > 2:3288612/1‑101 (MQ=255)
gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt > 2:479063/1‑101 (MQ=255)
gggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGCCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCAt < 2:3659728/101‑1 (MQ=255)
ggCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATc < 2:2549645/101‑1 (MQ=255)
gCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATcc < 1:567001/101‑1 (MQ=255)
gTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCgg > 2:2396631/1‑101 (MQ=255)
tGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTAtagatcggaag > 2:3091886/1‑91 (MQ=255)
tCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAg < 2:2415952/101‑1 (MQ=255)
gAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcg > 2:1632337/1‑101 (MQ=255)
gAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcg < 1:1603563/101‑1 (MQ=255)
aaaC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAgcgc > 2:1770907/1‑101 (MQ=255)
aaC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGcgcc > 2:403740/1‑101 (MQ=255)
cTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCcgcg < 1:4102018/101‑1 (MQ=255)
tGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCgcgc < 2:2993727/101‑1 (MQ=255)
gcg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCa < 2:2700676/101‑1 (MQ=255)
cg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAg < 1:1925214/101‑1 (MQ=255)
cg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAg < 1:2204414/101‑1 (MQ=255)
cg.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAg > 2:152777/1‑101 (MQ=255)
g.gcgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGt > 2:927227/1‑101 (MQ=255)
cgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCg > 1:1466493/1‑101 (MQ=255)
cgTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCg > 1:3001718/1‑101 (MQ=255)
gTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGc < 1:3251076/101‑1 (MQ=255)
tGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAACCTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCCGTCGcc > 2:863440/1‑100 (MQ=255)
tGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGcc > 2:2183684/1‑100 (MQ=255)
gTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTccc < 2:3853157/101‑1 (MQ=255)
gTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTccc < 2:1457594/101‑1 (MQ=255)
ttGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTcccc > 2:560565/1‑101 (MQ=255)
gtGCCAGTGATAGA.C.GCCGTGGG.CGTCGCTGCCCCCGCGGGCGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTcccc < 2:323376/100‑1 (MQ=255)
ccAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCcg < 2:1802237/101‑1 (MQ=255)
cAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCcgc < 1:1771026/101‑1 (MQ=255)
|
GGGGCGTGGATCGAAACTGGTATGGATCTGGCGCAAACGGAAAGTCTGTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CTGCG.GCGTGAGTTGCCAGTGATAGA.C.GCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCGCCGCCTATCGCATCCGGTCGAGCGCCGCGCAGTCGCTCCCCCCGCGG > NC_014034/1395714‑1395914
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|