| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,613,981 | C→T | 3.4% | intergenic (+144/+83) | rnd2 → / ← uvrD | ribonuclease D/DNA helicase II |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,613,981 | 0 | C→T | 3.4% | 3.7 ‑1.2 ‑0.3 | 116 | intergenic (+144/+83) | rnd2/uvrD | ribonuclease D/DNA helicase II |
| Reads supporting (aligned to +/- strand): new base (0/4): ref base (38/74): total (38/78) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.01e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.70e-01 | ||||||||||
Only 100 of 136 total aligned reads displayed.
TCCCCCTGCCCGCCGAGGGCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCACGTCGTC > NC_014034/1613882‑1614081
|
ccccccGGCCCGCCGAGGGCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTgcg < 1:3582438/100‑1 (MQ=255)
ccTGCCCGCCGAGGGCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGTCGCG.CCGCCCGGGGGGGGGGCCGGGCCTTTT.TTGGGCtg > 1:4130850/1‑100 (MQ=2)
ccccGCCGGGCGCCCAAA.GCCCCCGGCCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTgggg < 1:3279009/100‑1 (MQ=14)
cccGCCGGGGGCCAAAG.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGa < 1:1157078/101‑1 (MQ=255)
gccgGGGCCCCAAG.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAAc < 1:3532177/101‑1 (MQ=255)
ccgGGGGCCAAAG.GCCCCGCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACg < 2:3923175/101‑1 (MQ=17)
ccgAGGGCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGGGTCGCGCCCC.CCGGGGGGGGGGGGGGGCCCTTG.TTG.GCTTggggggaag > 1:2658442/1‑96 (MQ=2)
ccgAGGGCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGTCGCG.CCGCCCGGGGGGGGGGGCGGGCCTTT..TTGGGCTTtggggggag > 1:1780573/1‑96 (MQ=2)
ccgAGGGCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCAGTCGCG.CCC.CCCGGGCGGGGCGCGGGGCCTTG.TTGTGCTTGGGGagaag > 2:2599767/1‑97 (MQ=11)
gggCCAAAA.GGCCCTGGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCt < 1:2024605/101‑1 (MQ=255)
gccccAAA.GGCCCCCGCCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCtt < 2:3197684/99‑1 (MQ=255)
gCCCAAAGGGCCCTGGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCtt < 2:3614989/101‑1 (MQ=17)
gCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCACTCGCC.CCG.CCCGGGGGGGGGGGCGGCCCTTG.TTTCGCTCGGGGGGACgggcgtt > 2:578258/1‑96 (MQ=2)
cAAA.GGCCCTCGCCCTGCCCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.Ccg < 2:1170347/101‑1 (MQ=255)
aa.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGGCTTCGCG.CCGCCCGGGGGGGGGGCCGGGCCTTTT.TTG.GCCTGGGGGAAAGGGCTTG.Cctcg > 2:1256094/1‑101 (MQ=2)
tgggcgggcccccgccccgcCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTg < 2:510975/91‑1 (MQ=255)
tCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCTTCGCG.CCG.CCCGGGGGGGGGGGAGGCCCTTG.TTTCGCTTGGGGGAACGGGCTTG.GCGCGGCTGTTg > 1:598150/1‑101 (MQ=9)
ggCCTGCGCCCGCCCCGCCATCGGCGGGTGGGTTCGCG.CGG.CCGGGGCGGGGGGCCGGGCGTTGTTTTCGTTTTGGG.GAGGGTCTTG.TCGCGGGTGTTgtg > 1:2715634/1‑99 (MQ=2)
ggCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCg < 1:194023/101‑1 (MQ=255)
ccggcccccgccccgcCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.At < 1:1283370/95‑1 (MQ=255)
ccTGCGCCCGCCCCGCCATCGGCGGGGGGATTCGCG.CCG.CCCGGGGGGGGGGCAGGGCCTTT.TTTCGCTTGGGGGGAAGGGCTTG.CCGCGGCCGGTGCggg > 1:2644888/1‑99 (MQ=9)
cTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.g < 2:4215361/101‑1 (MQ=255)
tGCGCCCTCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.gc < 2:3404137/101‑1 (MQ=255)
cccccgccccgcCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.gcgg < 1:2524393/99‑1 (MQ=255)
ccccgccATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCgggg < 1:1701793/101‑1 (MQ=255)
cccgcccatggcgggcgCATTCGCG.CCG.CCGGGGCGGGGCGCAGGCGTCCC.GCGCGCTTGGGGAGGCGGTCTTGTCCCCGGCTTTGGCG.GG.GCCGGGgggg > 2:3656112/10‑101 (MQ=17)
cccgccATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGa < 1:3744762/101‑1 (MQ=255)
ccgccATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGaa < 1:3293584/101‑1 (MQ=255)
ccgccATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGaa < 1:3440121/101‑1 (MQ=255)
cATGGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGc < 1:2872640/101‑1 (MQ=255)
cATCGGCGGGCGCATTCGCG.CCG.CCGGGGGGGGGCGCCGGCCCTTG.TTGCGCTTGGGGGAACGGGCTTG.CCGCGGCTGTTGCG.AT.GCGGGGGGGGGAAggg > 2:1648575/1‑100 (MQ=17)
tCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAg < 2:2950912/101‑1 (MQ=255)
ggcgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTg < 2:136521/101‑1 (MQ=255)
gcgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGc < 1:3236022/101‑1 (MQ=255)
gcgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGc < 2:1177712/101‑1 (MQ=255)
cgggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGcc > 2:1148540/1‑101 (MQ=255)
gggcgCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGccc < 1:3937747/101‑1 (MQ=255)
gcgcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCtt < 2:2277145/101‑1 (MQ=255)
ggcATTCGCG.CCG.CGGGGGCGGGACGAAGGACTTTG.TTGCGCTTGGGGAAACGGTCTTG.GCGCGGTTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTc < 2:1395382/100‑1 (MQ=21)
gcATTGGCG.CCG.CCGGGGCGGGACGCAGGTCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc < 2:1483956/101‑1 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc > 1:2378943/1‑101 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc < 1:365695/101‑1 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc > 2:2142513/1‑101 (MQ=255)
gcATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTcc > 2:3021192/1‑101 (MQ=255)
cATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCt < 1:495670/101‑1 (MQ=255)
cATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCt < 2:4072670/101‑1 (MQ=255)
cATTCGAG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGCGGAAACGGTCTTC.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCt < 2:495044/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAGGGCAGTGCCCTTCCTg < 2:1067604/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg < 1:3435426/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg < 1:148577/101‑1 (MQ=255)
aTTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTg > 2:636214/1‑101 (MQ=255)
tCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGAt < 1:3727770/101‑1 (MQ=255)
cgcg.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATc < 1:3918855/101‑1 (MQ=255)
gcgcggcgggggggGGGGACGAAGGCCTCTG.TCGTGCTTGGGGAAACGGTCTTG.GCACAGGTGATGCGCCA.GCGGGCGGGGAAAGGCAGTGCCTTTCCCGa < 2:2936998/91‑1 (MQ=21)
gcg.cCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATcc > 1:924237/1‑101 (MQ=255)
cccgcggggggggCGGGCCAAAGGCCTCTG.TCGTGCTTGGGGAAACGGTCTTG.GCACAGGTGATGCG.CCAGCGGGCGGGGAAAGGCAGTGCCTTTCCCGAt < 2:2467004/92‑1 (MQ=25)
gcttcggcgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGGGGGGGAAGGCAGTGCCCTTCCCGGTcc > 2:3586145/8‑101 (MQ=18)
g.ccg.ccGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGc > 1:1870179/1‑101 (MQ=255)
cgcggggggggCGGGCCAAAGGCCTCTG.TCGTGCTTGGGGAAACGGTCTTG.GCACAGGTGATGCGCCA.GCGGGCGGGGAAAGGCAGTGCCTTTCCCGATcc < 2:3571034/94‑1 (MQ=25)
ccg.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGcc < 2:1138551/101‑1 (MQ=255)
cg.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGccc < 2:2715428/101‑1 (MQ=255)
g.ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCg < 1:2878381/101‑1 (MQ=255)
cggcgGGGCGGGACGCAGGGCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGccc < 1:3401838/98‑1 (MQ=255)
ccgGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGa > 1:876499/1‑101 (MQ=255)
ggggCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAAc < 2:598086/101‑1 (MQ=255)
gggCGGGACGCAGGTCTTTG.TTGCGCTGGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAAcc < 2:4235511/101‑1 (MQ=255)
gggCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAAcc < 2:1780454/101‑1 (MQ=255)
ggCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCg > 1:1682719/1‑101 (MQ=255)
cGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCggg < 1:1250866/101‑1 (MQ=255)
gggACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCgggg > 2:4213828/1‑101 (MQ=255)
ggACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGc < 2:762325/101‑1 (MQ=255)
cGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCa < 1:809052/101‑1 (MQ=255)
cGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCa > 2:4029227/1‑101 (MQ=255)
cGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCa < 2:3323981/101‑1 (MQ=255)
gccggCGTTTG.TTGCGCTTGAGAAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCGGCCCGAACCGGGGCTCAg < 2:3573578/98‑1 (MQ=18)
gCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAg > 1:2884441/1‑101 (MQ=255)
gCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAg > 2:3374061/1‑101 (MQ=255)
cAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGa > 2:1481005/1‑101 (MQ=255)
aGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGaa > 2:1732131/1‑101 (MQ=255)
aGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGaa > 1:2196991/1‑101 (MQ=255)
ggCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAAc > 1:2921339/1‑101 (MQ=255)
gCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACg < 1:3567847/101‑1 (MQ=255)
ccTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGACCCGGGGCTCAGAACgg > 1:1909566/1‑101 (MQ=255)
ccTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACgg < 2:3918938/101‑1 (MQ=255)
ccTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAACGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACgg < 2:2163169/101‑1 (MQ=255)
cTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGc < 2:1806238/101‑1 (MQ=255)
cTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGc < 2:1168388/101‑1 (MQ=255)
cTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGc > 1:245894/1‑101 (MQ=255)
tttG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCa > 2:3275189/1‑101 (MQ=255)
tttG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCa > 1:1500723/1‑101 (MQ=255)
tg.ttgCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcg < 2:2658236/101‑1 (MQ=255)
tg.ttgCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcg > 2:4183859/1‑101 (MQ=255)
g.ttgCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcgt > 2:2422826/1‑101 (MQ=255)
g.ttgCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcgt > 1:2169241/1‑101 (MQ=255)
tgCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcgtcg > 1:2988413/1‑101 (MQ=255)
tgCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcgtcg > 2:767641/1‑101 (MQ=255)
gcgcTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcgtcgt < 2:3715286/101‑1 (MQ=255)
gcgcTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCAcgtcgt < 2:409751/101‑1 (MQ=255)
gcgcTTGGGGAAACGGCCTTG.TCGCGGCTGTTGCG.AT.GCGGGCGGGGACAGGCAGGGCCCTTCATGTTCCGCCCGAACAGGGGCTCACAACgtgacgccga > 2:1014475/1‑92 (MQ=18)
cgcTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCACgtcgtc > 1:4026757/1‑101 (MQ=255)
|
TCCCCCTGCCCGCCGAGGGCCCAAA.GGCCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCATTCGCG.CCG.CCGGGGCGGGACGCAGGCCTTTG.TTGCGCTTGGGGAAACGGTCTTG.CCGCGGCTGTTGCG.AT.GCGGGCGGGGAAAGGCAGTGCCCTTCCTGATCCGCCCGAACCGGGGCTCAGAACGGCACGTCGTC > NC_014034/1613882‑1614081
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|