| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,554 | C→T | 3.6% | intergenic (+26/+168) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,554 | 0 | C→T | 3.6% | 3.6 ‑0.6 ‑0.2 | 111 | intergenic (+26/+168) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (1/3): ref base (18/89): total (19/92) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.33e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.00e-01 | ||||||||||
Only 100 of 134 total aligned reads displayed.
CCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGGCGCTGCCCCC.CTC.CT..G..CTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566455‑2566644
|
ccTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCc.ctc < 2:878730/101‑1 (MQ=255)
aTGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..g < 1:2279289/101‑1 (MQ=255)
tGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..gg < 1:1918000/101‑2 (MQ=255)
gCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..ggc < 1:3437533/101‑3 (MQ=255)
cGATGGTCGATGCCATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..ggcc < 2:2937542/101‑4 (MQ=38)
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..ggcct < 1:1058341/101‑5 (MQ=39)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCCGCCCCc.ctc.cttggcct > 1:2144324/1‑95 (MQ=255)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGGGGGCGGCCCc.ccc.ctttgcctt > 1:3714625/1‑94 (MQ=255)
gATGCGCTCGGCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.a < 1:705356/101‑1 (MQ=25)
gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.a < 2:2743559/101‑1 (MQ=37)
aTGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.aa > 2:2028863/1‑101 (MQ=37)
tGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AAt < 2:3129681/101‑1 (MQ=37)
gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AAtt < 1:3672165/101‑1 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTc < 1:2286059/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.cc < 1:486815/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CCC.TT..GGCCCTC.GGCC.AATTCC.cc > 1:2553452/1‑101 (MQ=25)
gcgggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.ccccc < 2:2391411/98‑1 (MQ=25)
ccTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.ccccc < 2:203294/100‑1 (MQ=25)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.ccccc < 1:1187826/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.cccccc < 2:702261/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.cccccc < 2:2895798/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCgg < 1:503621/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCgg < 1:1099121/101‑1 (MQ=25)
cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGa < 1:1829286/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGGGCCGCCCCC.CCCTTT..GC.CTTC.GGCC.AAATCA.CCCCCCcggga > 1:1978096/1‑99 (MQ=255)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGat < 2:2168907/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGat < 2:4180170/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGGGCTGCCCCC.CCC.TT..GGCCTTC.CGCC.AAATCC.CCCCCCCGGgta > 2:3168341/1‑101 (MQ=255)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGata < 2:1018617/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGata < 1:1708987/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGatat < 2:4131168/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCCGGatat > 1:2119448/1‑101 (MQ=25)
aGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.ACCCCCGGGATAtt > 2:1052333/1‑101 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATAttt < 1:1697153/101‑1 (MQ=21)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATAttt < 2:77585/101‑1 (MQ=21)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCggg < 2:2145273/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGc < 1:1268244/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCCGCCCCC.CTC.TTTGG..CCTC.GGCCAAATCCA.CCCCCCcggtacttttggg > 2:3685661/1‑91 (MQ=255)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCCGGCTATTTCGGGCa > 2:861613/1‑101 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CCC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCCGGAGAtttttggcca > 2:3957956/1‑94 (MQ=18)
gccgccGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAg < 1:45837/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGGGCTGGCCCC.CTC.TT..GGCCTTT.CGCC.AATTCA.CCCCCCCGGACATTTCGGGCAAGaa > 1:3980246/1‑100 (MQ=255)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:2060072/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:1620144/101‑1 (MQ=21)
cgccgcGACATCGGCGGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGAt < 2:523134/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATa < 2:3108432/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.CATTCA.CCCCCCCGGATATTTCGGGCAAGATaaa > 1:3906941/1‑101 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAaag < 1:430223/101‑1 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaga > 2:3176725/1‑101 (MQ=21)
cgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAaaga < 1:1811536/101‑1 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAaagaa < 1:19493/101‑1 (MQ=21)
aCATCGGCTGGCGCTCGCTCTGAGACGAAACGGGGGGCCCCGCCCCC.CTT.TTG.G..CCTCGGGCC.AATTCA.CCCCCCGCGCCGTTTCGGGGGCGATAaaaaag > 1:4115095/1‑101 (MQ=9)
aTCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.CATTCA.CCCCCCCGGAAATTTTGGGGAAGATAAAGAAggg > 2:3039499/1‑100 (MQ=18)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc > 1:3848117/1‑101 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc < 1:3471783/101‑1 (MQ=21)
ggCTGGGGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:3073594/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt > 1:2196690/1‑101 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2169706/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2327547/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 1:3248456/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc > 2:1009588/1‑101 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3376059/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:1533020/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 2:3626458/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:823803/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt > 2:3297536/1‑101 (MQ=21)
gcgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:2428260/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:509035/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:2076249/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:902741/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:31132/101‑1 (MQ=21)
ctctGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCt < 1:2775027/101‑1 (MQ=21)
tctGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:1173596/101‑1 (MQ=21)
tctGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:298907/101‑1 (MQ=21)
tGAGACGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc > 2:2272230/1‑101 (MQ=21)
gagaCGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 1:1222553/1‑101 (MQ=21)
gagaCGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 2:1826958/1‑101 (MQ=21)
gagaCGAAACAGGGGGCGCTACCCCC.CTC.TT..GGCCTTC.GGCC.AATTCC.CCCCCCGGAATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc < 1:3307486/101‑1 (MQ=21)
agaCGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc < 2:236725/101‑1 (MQ=21)
aCGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGa > 1:1787489/1‑101 (MQ=21)
cGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa > 2:3077751/1‑101 (MQ=21)
cGAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa < 1:3404108/101‑1 (MQ=21)
gAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:2702264/101‑1 (MQ=21)
gAAACGGGGGGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:1593263/101‑1 (MQ=21)
aaacggggggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGcccccaat > 2:4223765/6‑96 (MQ=18)
aacggggggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCCGGGAAATTT.GGGCCAGAAAAAGAAAGGCTTTTTCTTTCATCTTTcccccaaaa > 1:2185736/5‑95 (MQ=2)
aacggggggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata < 1:3581109/97‑1 (MQ=25)
cggggggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:1120311/99‑1 (MQ=25)
cggggggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:4015211/99‑1 (MQ=25)
cagggggCGCTG.CCCC.CTC.TT..GGCCTTT.GGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggg > 1:3951563/3‑101 (MQ=0)
ggggggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 2:1571825/100‑1 (MQ=25)
agggggCGCTG.CCCC.CTC.TT..GGCCTTT.GGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:4076720/2‑101 (MQ=0)
gggCGCTGCCCCCTCTT.GG..C..CTTT.GGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:601326/1‑98 (MQ=2)
gggCGCTG.CCCC.CTC.TT..GGCCTTT.GGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:1254032/1‑98 (MQ=2)
ggCGCTGCCCCCTCTT.GG..C..CTTT.GGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:1048067/101‑5 (MQ=2)
ggCGCTGCCCCCTCTT.GG..C..CTTT.GGCC.AATTCA..CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:2334609/101‑5 (MQ=2)
cgcTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCCAAATATCCCggggg > 2:3022218/1‑101 (MQ=25)
gcTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCT.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa < 1:2866857/101‑1 (MQ=37)
ccgCCCCC.CTC.TT..GGCCTTC.GGCC.AAGTCC.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 2:3568447/99‑1 (MQ=37)
cTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 2:1142532/101‑1 (MQ=37)
|
CCTATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGGGCGCTGCCCCC.CTC.CT..G..CTTC.GGCC.AATTCA.CCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566455‑2566644
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|