| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,556 | T→G | 3.6% | intergenic (+28/+166) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,556 | 0 | T→G | 3.6% | 2.4 ‑0.6 ‑0.0 | 112 | intergenic (+28/+166) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (1/3): ref base (18/89): total (19/93) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.33e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.99e-01 | ||||||||||
Only 100 of 132 total aligned reads displayed.
TATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGG.GGCGCTGCCCCC.CTC.CT..G..CTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566457‑2566644
|
tATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGCCCCc.ccc.ct > 1:1789161/1‑101 (MQ=255)
aTGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..g < 1:2279289/101‑1 (MQ=255)
tGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..gg < 1:1918000/101‑2 (MQ=255)
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..ggcct < 1:1058341/101‑5 (MQ=39)
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..ggcct < 1:1113287/101‑5 (MQ=39)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCCGCCCCc.ctc.cttggcct > 1:2144324/1‑95 (MQ=255)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGG.GGGGGCGGCCCc.ccc.ctttgcctt > 1:3714625/1‑94 (MQ=255)
gATGCGCTCGGCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.a < 1:705356/101‑1 (MQ=25)
gATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.a < 2:2743559/101‑1 (MQ=37)
aTGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.aa > 2:2028863/1‑101 (MQ=37)
tGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AAt < 2:3129681/101‑1 (MQ=37)
gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AAtt < 1:1545824/101‑1 (MQ=37)
gCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TA..GGCCTTC.GGCC.AAtt < 1:3566316/101‑1 (MQ=37)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTc < 1:3392828/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAcc < 1:486815/101‑1 (MQ=37)
tCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CCC.TT..GGCCCTC.GGCC.AATTCCcc > 1:2553452/1‑101 (MQ=25)
cGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAccc < 2:659481/101‑1 (MQ=37)
gcgggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAccccc < 2:2391411/98‑1 (MQ=25)
ccTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAccccc < 2:203294/100‑1 (MQ=25)
aCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAccccc < 1:1187826/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAcccccc < 2:702261/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAcccccc < 2:2895798/101‑1 (MQ=25)
tGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCg < 1:2181231/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCgg < 1:503621/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCgg < 1:1099121/101‑1 (MQ=25)
ggCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCgg < 1:2944444/101‑1 (MQ=25)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGGTGGGGCTGCCCCC.CTC.TT..GGCCCTC.CGCC.AATTCACCCCCCcgg > 2:3490303/1‑101 (MQ=25)
cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGa < 1:1829286/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCCGCCCCC.CCCTTT..GC.CTTC.GGCC.AAATCACCCCCCcggga > 1:1978096/1‑99 (MQ=255)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGat < 2:2168907/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGat < 1:3194193/101‑1 (MQ=25)
ccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGat < 2:4180170/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGCCCCC.CCC.TT..GGCCTTC.CGCC.AAATCCCCCCCCCGGgta > 2:3168341/1‑101 (MQ=255)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGata < 1:1708987/101‑1 (MQ=25)
cGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGata < 2:1018617/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGatat < 2:4131168/101‑1 (MQ=25)
aGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCAACCCCCGGGATAtt > 2:1052333/1‑101 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGGTGCCCCC.CCC.TTGGG..CTTC.GGCC.AATTCCCCCCCCGGGATATTTc > 1:1249184/1‑101 (MQ=25)
ttCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCggg < 2:2145273/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGc < 1:1268244/101‑1 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCCGCCCCC.CTC.TTTGG..CCTC.GGCCAAATCCACCCCCCcggtacttttggg > 2:3685661/1‑91 (MQ=255)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCa < 2:2900729/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCCGGCTATTTCGGGCa > 2:861613/1‑101 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAGCGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCaa < 1:473092/101‑1 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CCC.TT..GGCCTTC.GGCC.AATTCACCCCCCCGGAGAtttttggcca > 2:3957956/1‑94 (MQ=18)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGGGCTGGCCCC.CTC.TT..GGCCTTT.CGCC.AATTCACCCCCCCGGACATTTCGGGCAAGaa > 1:3980246/1‑100 (MQ=255)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGAt < 2:2060072/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGAt < 2:1620144/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGAt < 2:3164/101‑1 (MQ=21)
cgccgcGACATCGGCGGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGAt < 2:523134/101‑1 (MQ=21)
gcgACATCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAaag < 1:430223/101‑1 (MQ=21)
aCATCGGCTGGCGCTCGCTCTGAGACGAAACGGGG.GGCCCCGCCCCC.CTT.TTG.G..CCTCGGGCC.AATTCACCCCCCGCGCCGTTTCGGGGGCGATAaaaaag > 1:4115095/1‑101 (MQ=9)
aTCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.CATTCACCCCCCCGGAAATTTTGGGGAAGATAAAGAAggg > 2:3039499/1‑100 (MQ=18)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc > 1:3848117/1‑101 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTc < 1:3471783/101‑1 (MQ=21)
ggCTGGCGCGCCCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtt < 1:1943026/101‑1 (MQ=21)
gCTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCttt > 1:2196690/1‑101 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2327547/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCtttt < 1:2169706/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc > 2:1009588/1‑101 (MQ=21)
tGGCGCGCGCTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTc < 1:3248456/101‑1 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3376059/101‑1 (MQ=21)
gcgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:3727302/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:1533020/101‑1 (MQ=21)
cgcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:2512408/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCCCCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:823803/101‑1 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt > 2:3297536/1‑101 (MQ=21)
gcgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:2428260/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:2076249/101‑1 (MQ=21)
cgcgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:509035/101‑1 (MQ=21)
gcgcTCTGAGGCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCa < 1:2096435/101‑1 (MQ=21)
cgcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:4145111/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:31132/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:22833/101‑1 (MQ=21)
gcTCTGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATc < 1:902741/101‑1 (MQ=21)
tctGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:298907/101‑1 (MQ=21)
tGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTGTTTTTTTTTCTTCTTGc > 2:853783/1‑101 (MQ=18)
tGAGACGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGc > 2:2272230/1‑101 (MQ=21)
gagaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 2:1826958/1‑101 (MQ=21)
gagaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGcc > 1:1222553/1‑101 (MQ=21)
agaCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc < 2:236725/101‑1 (MQ=21)
aCGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGa > 1:1787489/1‑101 (MQ=21)
cGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa > 2:3077751/1‑101 (MQ=21)
cGAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaa < 1:3404108/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCTCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:3806296/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:2702264/101‑1 (MQ=21)
gAAACGGGG.GGCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 2:1593263/101‑1 (MQ=21)
aacgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAata < 1:3581109/97‑1 (MQ=25)
acgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAatat < 2:4156408/98‑1 (MQ=25)
cgggg.ggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:1120311/99‑1 (MQ=25)
caggg.ggCGCTG.CCCC.CTC.TT..GGCCTTT.GGCC.AATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggg > 1:3951563/3‑101 (MQ=0)
gggg.ggCGCTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc < 2:1571825/100‑1 (MQ=25)
gg.ggCGCTGCCCCCTCTT.GG..C..CTTT.GGCC.AATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggggga < 1:3959563/101‑3 (MQ=2)
g.ggCGCTGCCCCCTCTT.GG..C..CTTT.GGCC.AATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggag > 1:601326/1‑98 (MQ=2)
ggCGCTGCCCCCTCTT.GG..C..CTTT.GGCC.AATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:2334609/101‑5 (MQ=2)
ggCGCTGCCCCCTCTT.GG..C..CTTT.GGCC.AATTCA.CCCCTGGGATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggggagc < 1:1048067/101‑5 (MQ=2)
cgcTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCCAAATATCCCggggg > 2:3022218/1‑101 (MQ=25)
gcTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCTCCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa < 1:2866857/101‑1 (MQ=37)
ccgCCCCC.CTC.TT..GGCCTTC.GGCC.AAGTCCCCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 2:3568447/99‑1 (MQ=37)
cTGCCCCC.CTC.TT..GGCCTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg < 2:1142532/101‑1 (MQ=37)
|
TATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACGAAAC.GGG.GGCGCTGCCCCC.CTC.CT..G..CTTC.GGCC.AATTCACCCCCCGGGATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCC > NC_014034/2566457‑2566644
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|