| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,640,198 | A→G | 15.2% | intergenic (‑174/+102) | thrS ← / ← RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,640,198 | 0 | A→G | 15.2% | 45.1 ‑2.4 ‑0.0 | 131 | intergenic (‑174/+102) | thrS/RCAP_rcc02462 | threonyl‑tRNA synthetase/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (14/6): ref base (53/58): total (67/64) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.92e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.89e-01 | ||||||||||
Only 100 of 139 total aligned reads displayed.
GGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGG..CTTCGGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCC > NC_014034/2640099‑2640296
|
aGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CCCCCCCCGAGGTATTTGGAGCAATATGa < 2:4096019/101‑1 (MQ=25)
ggCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaa < 1:1203772/101‑1 (MQ=25)
gCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaa < 2:3662876/101‑1 (MQ=25)
gtCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATGaaagacc < 2:4056931/101‑5 (MQ=21)
aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 1:3137833/101‑1 (MQ=25)
aaCCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATg < 2:2487968/101‑1 (MQ=21)
ccGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATggg < 1:1451997/101‑1 (MQ=25)
gcgcTTCTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCAt < 1:685582/101‑1 (MQ=21)
gcTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCt < 1:2672922/101‑1 (MQ=25)
cTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCtt < 1:3089224/101‑1 (MQ=21)
ttttGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTg < 2:3042280/101‑1 (MQ=25)
gcgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTc < 1:251102/101‑1 (MQ=25)
cgcAGGCAAAAGGGGGGGGCGGCCCCCCCCTTTGGC.CTTCGGCCAATTACCCCCCCCGGGGT.TTTGG.GGAAGAAGAAAAAACAAGGGGTT.ATCTTTCCTCa > 2:1067304/1‑101 (MQ=255)
cgcAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCa < 1:925952/101‑1 (MQ=25)
gccccgaaaAGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAat > 1:1398393/7‑101 (MQ=14)
cAGGCAAAAGGGGGGGGCCGCCCCCCCC.TTTGCCCTTGGGCCAATT.ACCCCCCCG.GGGATTTTGGGGAAAATGAAAA.ACCATGGGTTTATCTTTCCTCaaa > 2:2451290/1‑101 (MQ=255)
ccccgaaaAGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGCGAAAGGA..TGGGGTTTATCTTGCCCCAAata > 2:723395/6‑101 (MQ=9)
ggCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAata < 1:210318/101‑1 (MQ=21)
cccgaaaAGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAatat < 1:536724/97‑1 (MQ=17)
cccgaaaAGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGACATTTGCGGCAAGGTGAAAGGA..TGGGGCTTATCTTGCCCCAAatat > 2:1809181/5‑101 (MQ=9)
gCAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAatat < 2:1115952/101‑1 (MQ=25)
cAAAAGGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATc > 2:3948178/1‑101 (MQ=21)
gaaaAGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATccc < 2:2171381/100‑1 (MQ=17)
aaaGGGGGGAGCTGCCCCCCTC.TTGGC.CTTTGGCCAATT.CACCCCCCGCGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATacc > 2:551273/1‑101 (MQ=18)
aaaAGGGGGCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGGGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCg > 1:131524/1‑101 (MQ=17)
aagggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggg > 2:1863998/3‑101 (MQ=18)
ggggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg < 2:211406/101‑1 (MQ=25)
ggggggCCCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCggg < 2:2338473/101‑1 (MQ=25)
agggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg > 2:4098878/2‑101 (MQ=18)
agggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggg > 1:529732/2‑101 (MQ=18)
gggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg > 2:1643891/1‑101 (MQ=18)
gggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCggggg < 1:1490286/101‑1 (MQ=18)
gggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggg < 2:1443836/101‑1 (MQ=25)
ggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggt > 2:3483856/1‑100 (MQ=18)
ggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg > 2:4027452/1‑101 (MQ=18)
ggggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggg > 2:2878552/1‑101 (MQ=18)
gggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA.TGGGGGTT.ATCTTGCCCCAAATATCCCgggggtg > 1:4120356/1‑99 (MQ=18)
gggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCgggggg < 1:3920565/101‑1 (MQ=25)
ggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtga < 1:439035/101‑4 (MQ=21)
ggCGCTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGa < 2:2075963/101‑1 (MQ=25)
gcgcTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgag < 2:3270389/101‑5 (MQ=21)
gcgcTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAg < 2:3909766/101‑1 (MQ=25)
gcTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGATATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggc > 2:3670734/1‑95 (MQ=21)
gcTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGNGNGtn > 1:1363739/1‑100 (MQ=25)
cTGCCCCCCTC.TTGGC.CTTCGGCCAATT.CACCCCCCGGGAAATTTGCGGCAAGGTGAAAGGA..TGGGGTTTATCTTGCCCCAAATATCCCgggggtgaggcg > 1:960724/1‑94 (MQ=25)
gCCCCCCTC..TGG..CTTC..CCCATT.CCCCCCCCGGGGTATTTCGGGCAAGATGAAAGGCATCCGGTTTCATCTTGCTGCAAATATCCCGGGGGGAGTccgcttg < 1:3647441/101‑6 (MQ=17)
ccccTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGaaa < 1:3978114/101‑1 (MQ=37)
tcttc.tTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg < 1:337064/98‑1 (MQ=25)
cccTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 1:1208728/1‑101 (MQ=37)
cccTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAg > 1:1352283/1‑101 (MQ=37)
ccTC.TTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAgg > 2:2793688/1‑101 (MQ=37)
ctc.tTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 1:3750789/1‑101 (MQ=37)
ctc.tTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGa > 1:336164/1‑101 (MQ=37)
tc.tTGGC.CTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGAc > 1:2479405/1‑101 (MQ=37)
tc.tTGGC.CTTCGGCCAATT.CAACCCCCGAGGAATTTGGAGCAAGATG.AAAGACCATGGGTTAATCTTGAATCAAATATCCCGGGGGGAGTCCTGAAAgaga > 2:337013/1‑98 (MQ=25)
ttggccTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgg < 2:1208634/96‑1 (MQ=37)
tggccTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACggg > 1:3496281/5‑101 (MQ=37)
tggccTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACagg > 2:3866125/5‑101 (MQ=25)
ggccTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg < 1:1280080/98‑1 (MQ=37)
ggccTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACgggg > 1:2898838/4‑101 (MQ=37)
cTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc > 1:824355/1‑101 (MQ=37)
cTTCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGc > 2:1764107/1‑101 (MQ=37)
ttCGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCa > 2:4017796/1‑101 (MQ=37)
cGGCCAATT.CCCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga < 1:1922506/101‑1 (MQ=255)
cGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 1:907509/1‑101 (MQ=37)
cGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 2:3534400/1‑101 (MQ=255)
cGGCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCaga > 1:3003586/1‑101 (MQ=255)
ggCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCagag < 1:3158304/101‑1 (MQ=255)
gCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc > 1:1952819/1‑101 (MQ=37)
gCCAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGc > 2:490034/1‑101 (MQ=37)
ccAATT.CGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcc < 2:3002284/101‑1 (MQ=255)
cAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc > 2:1709144/1‑101 (MQ=255)
cAATT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccc > 1:3660143/1‑101 (MQ=37)
aaTT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc < 2:67344/101‑1 (MQ=255)
aaTT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGcccc > 2:3597345/1‑101 (MQ=37)
aTT.CGCCCCCCGAGGTATTTGGAGCAAGATG.AAAGCCCATGGGGTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc < 2:463192/101‑1 (MQ=25)
aTT.CACCCCCCGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGccccc > 1:2473321/1‑101 (MQ=37)
tcaccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCt < 2:3330312/98‑1 (MQ=255)
caccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGAGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTc > 1:1174196/3‑101 (MQ=37)
accccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTcc > 1:4120075/2‑101 (MQ=255)
ccccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTccc > 1:2928867/1‑101 (MQ=255)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg < 1:1709259/101‑1 (MQ=255)
ccccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCgg < 1:3093020/101‑1 (MQ=255)
cccGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCggg < 2:225005/101‑1 (MQ=255)
cGAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTc < 1:3948438/101‑1 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt > 1:2761305/1‑101 (MQ=255)
gAGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt > 2:2863901/1‑101 (MQ=255)
gAGGTAGTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCt < 1:2254934/101‑1 (MQ=255)
aGGTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCtt < 1:2793907/101‑1 (MQ=255)
ggTATTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCttt > 2:1466929/1‑101 (MQ=255)
gTATTTGGAGCAAGATG.AAAGACCATGCGTTCATCTGGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtc < 1:1785083/101‑1 (MQ=25)
aTTTGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTtctc > 2:4159715/1‑101 (MQ=255)
tttGGAGCACGATG.AAAGACCATGGGATCATCTTGCCTCAAATAGCCCGGGGGAAGTCCTGAAAGGACGCGGTGCTGACCCCCCCACCCCACTCTTTTTCa > 2:752225/1‑101 (MQ=16)
ttGGAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCaa > 1:3191625/1‑101 (MQ=255)
ggAGCAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGc > 1:1490583/1‑101 (MQ=255)
gagcAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCg > 2:1188532/4‑101 (MQ=255)
gagcAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCg < 2:1952693/98‑1 (MQ=255)
cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGTAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 1:3591916/1‑101 (MQ=255)
cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc > 2:1060009/1‑101 (MQ=255)
cAAGATG.AAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTc < 1:161938/101‑1 (MQ=255)
|
GGCAGGCGTGTCAACCGTGGCGCTTTTGCGCAGGCAAAAGGGGGGCGCTGCCCCCCTC.TTGG..CTTCGGCCAATT.CGCCCCCCGAGGTATTTGGAACAAGATGAAAAGACCATGGGTTCATCTTGCCTCAAATATCCCGGGGGGAGTCCTGAAAGGACGGGGGGCAGAGCCCCCCTCCCGGGTCTTTCTCAAGCGTTCC > NC_014034/2640099‑2640296
Base quality scores:
ATCG
< 3 ≤
ATCG
< 16 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|