| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,004,034 | A→C | 17.1% | intergenic (+80/+96) | gfo → / ← lrp | glucose‑‑fructose oxidoreductase/leucine‑responsive regulatory protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,004,034 | 0 | A→C | 17.1% | 93.2 ‑2.8 ‑1.6 | 199 | intergenic (+80/+96) | gfo/lrp | glucose‑‑fructose oxidoreductase/leucine‑responsive regulatory protein |
| Reads supporting (aligned to +/- strand): new base (22/12): ref base (76/89): total (98/101) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.96e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.75e-02 | ||||||||||
Only 100 of 219 total aligned reads displayed.
GTGCGCGCGGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCGAGCGCTCAGG > NC_014034/3003934‑3004134
|
gTGCGCGCGGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCa < 1:1085432/101‑1 (MQ=255)
gTGCGCGCGGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCa < 1:2647225/101‑1 (MQ=255)
gTGCGCGCGGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCa < 2:199266/101‑1 (MQ=255)
gcgcgGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.Tc < 2:3444558/101‑1 (MQ=255)
cgGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCg > 1:3563701/1‑101 (MQ=255)
cgGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCg > 2:1876948/1‑101 (MQ=255)
cgGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.CGGGTATTTTGAACAAGGGGGAAAGCaataccc > 1:2973601/1‑95 (MQ=21)
gggCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTAAACCCCC.GGGATATTTGGACCAA.GGTGAAAGAAG.A.TCCCgg > 2:3360997/1‑101 (MQ=255)
gCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGtt > 2:3047463/1‑101 (MQ=255)
gCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGtt < 2:3854468/101‑1 (MQ=255)
cGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGttt < 2:1277589/101‑1 (MQ=255)
cGAGATCTAAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCCGACGGCCAATCCACCCCCC.GGGAGATTTGGACCAA.GGTGAACGCAG.A.TCCCGGttt > 2:3472452/1‑101 (MQ=38)
atcttCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTg < 1:491591/97‑1 (MQ=255)
agaTCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGc > 1:3809076/1‑101 (MQ=255)
agaTCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGc < 2:3387834/101‑1 (MQ=255)
gaTCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGcc < 1:3147018/101‑1 (MQ=255)
cTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.ttt < 2:1935779/101‑1 (MQ=255)
tGAGGGCAAGGCGGGGGGCGCGGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTc < 1:359028/101‑1 (MQ=255)
gggCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGGGAAAGCAG.A.TCCCGGTTTGCC.TTTCAcc > 1:1578434/1‑101 (MQ=255)
gCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCtt < 2:1582462/101‑1 (MQ=255)
cAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTg < 1:969716/101‑1 (MQ=255)
aaGGCGGGGGGGGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GCGATATTGGGACCAA.GGGGAAAGCAG.A.TCCCGGCTTGCC.TTTCACCttcg > 1:2471112/1‑99 (MQ=38)
aaGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTgg > 2:3272129/1‑101 (MQ=255)
ggCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGgcg < 1:3945212/101‑1 (MQ=255)
ggCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.CGGGTATTTGGACCAA.GGGGGAAGCAG.A.TCCCGGGTTGGC.TTTCACCTTGgcg > 1:869379/1‑101 (MQ=37)
ggggggCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.aa > 2:2365582/1‑101 (MQ=255)
ggggggCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGGGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.aa > 1:1682472/1‑101 (MQ=255)
ggggggCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.CGGGTATTTTGGCCAA.AGGGAAAACAG.A.TCCCCGGTTGGC.TTTCACCCTgggccca > 2:886641/1‑96 (MQ=16)
gggggCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.aaa < 1:3284533/101‑1 (MQ=255)
gggggCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.CGGAAATTTGGGCCAA.AGTGAAAGCAG.A.TCCCGGGTTGCC.CTTCACCCTTGCGC.aaa > 2:3667966/1‑101 (MQ=25)
ggggCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAat > 2:260844/1‑101 (MQ=255)
ggggCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAat > 1:4129647/1‑101 (MQ=255)
ggggCGCTGCCCCCCTCTTGGCCTGACGGCCAAGTCACCCCCC.GGGATATTTGGACCGA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAat < 1:3619473/101‑1 (MQ=255)
cgcTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATcc < 2:2896007/101‑1 (MQ=255)
cTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCg < 1:3074594/101‑1 (MQ=255)
gCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCggg < 2:2763891/101‑1 (MQ=255)
ccccccTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCgggg < 2:2275491/101‑1 (MQ=255)
cccccTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCggggg > 2:3033016/1‑101 (MQ=255)
ccccTCTTGGCCTGACGGCCAATTCACCCCCCGGGGAATTTTGGCCCAA.GGGGAAAAAAA.A.CCCCGGTTTGCCTTTTCCCTTTGGCCA.AAATCCCCCgggg > 2:751763/1‑101 (MQ=12)
ccTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAg > 1:3679784/1‑101 (MQ=255)
ctTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGGGAAAGCAG.A.TCCCGGGTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGGGTcc > 1:3023382/1‑101 (MQ=255)
ttGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGTTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTccc < 2:982978/101‑1 (MQ=255)
ttGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTccc < 1:695002/101‑1 (MQ=255)
gatctcTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTccc < 1:1942635/96‑1 (MQ=255)
ggCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCcgc > 1:3983479/1‑101 (MQ=255)
gCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCcgcg > 2:4172714/1‑101 (MQ=255)
cTGACGGCCAATTCCCCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCCCCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCggg < 1:2128812/101‑1 (MQ=255)
tGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCNGGGGGAGTCCCGCgggg > 2:930217/1‑101 (MQ=255)
gccGGCCAATTCCCCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCCCCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGa < 1:1434003/99‑1 (MQ=255)
gcGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGAc < 2:1083159/100‑1 (MQ=255)
aCGGCCAATTCCCCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGAc < 2:1955988/101‑1 (MQ=255)
aCGGCCAATTCACCCCCC.GGGATATTTGGACCAG.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGAc < 1:3668219/101‑1 (MQ=255)
aCGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGAc < 1:1640542/101‑1 (MQ=255)
aCGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGAc < 2:1230160/101‑1 (MQ=255)
aCGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGAc < 1:1068303/101‑1 (MQ=255)
ggCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACgg > 2:309383/1‑101 (MQ=255)
ccAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGCGTCCCGCGGGGACgggg > 2:2498185/1‑101 (MQ=255)
ccAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACgggg > 1:1567586/1‑101 (MQ=255)
ccAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACgggg > 2:1892372/1‑101 (MQ=255)
aaTTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAAGATCCCGGGGGGAGTCCCGCGGGGACggggcg > 1:1011810/1‑99 (MQ=255)
aTTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGc > 1:1492780/1‑101 (MQ=255)
aTTCACCCCCC.GGGATATTTGGACCAA.GGGGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGc > 1:1785884/1‑101 (MQ=255)
tCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCag < 2:3973737/101‑1 (MQ=255)
tCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCag > 1:1118269/1‑101 (MQ=255)
aCCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCagag > 1:4191610/1‑101 (MQ=255)
cccccc.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAgc > 2:2544382/1‑101 (MQ=255)
ccc.GGGATATTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgcccc < 1:2728365/101‑1 (MQ=18)
ccc.GGGATATTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgcccc < 2:2239536/101‑1 (MQ=17)
ccc.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAgcccc < 2:1695780/101‑1 (MQ=255)
cc.GGGATATTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccc < 2:1717502/101‑1 (MQ=17)
c.GGGATATTTGGCCCAA.GGTGAAAGCCGCG.CCCCGGGTT.CA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgcccccc > 1:2891537/1‑101 (MQ=18)
c.GGGATATTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgcccccc > 2:2869701/1‑101 (MQ=18)
gggATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGGCGAgacccccc > 1:701446/1‑100 (MQ=255)
ttatatTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccccct < 2:3828730/99‑3 (MQ=17)
ggATATTTGGCCCAA.GGTGAAAGCCG.CGCCCCGGGTT.CA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccccct > 2:1014468/1‑99 (MQ=18)
atatTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccccctag > 1:3828987/1‑97 (MQ=18)
tatTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccccctctt > 2:509458/1‑96 (MQ=18)
tatTTGGCCCAA.GGGGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccccctctt < 1:802885/101‑6 (MQ=17)
tatTTGGACCAA.GGTGAAAGCAG.A.ACCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGCGTCCCGCGGGGACGGGGGGCACAgcccccctgccc > 1:3425444/1‑101 (MQ=255)
atTTGGCCCAA.GGTGAAAGCCGCG.CCCCGGGTT.CA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccccctcttc > 1:1244090/1‑95 (MQ=18)
atTTGGCCCAA.GGTGAAAGCCG.C.GCCCCGGGTTCA.TTTCCCCTTGGCGG.AAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGGCAGCgccccccctcttc < 2:1733232/101‑7 (MQ=17)
atTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAgcccccctgcccc < 1:486650/101‑1 (MQ=255)
tttGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAgcccccctgccccc > 2:483965/1‑101 (MQ=255)
ttGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAgcccccctgcccccc > 1:2084643/1‑101 (MQ=255)
ttGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAgcccccctgcccccc > 2:2493033/1‑101 (MQ=255)
tgcaCCAA.GGGGAAAGTGC.A.CCGCGGTTTATC.TTTC.CCTTCGCCCAAAATAGCGGGGGGGGGGTCCCGGGGGGCGGGGGGCCAGCccccccctgcccccct < 2:701369/98‑1 (MQ=255)
ggACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGcccccctgcccccctg < 2:2719153/101‑1 (MQ=255)
gACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTgg > 2:4029056/1‑101 (MQ=255)
aCCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTggg > 2:18351/1‑101 (MQ=255)
ccAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTTACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTgggg > 1:3754295/1‑101 (MQ=255)
cAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGc > 1:3453949/1‑101 (MQ=255)
aa.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGCCGGGGGGAAGAGCCCCCCCGCCCCCCTGGGGcc > 2:1519726/1‑101 (MQ=255)
aa.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGcc > 1:197615/1‑101 (MQ=255)
aa.GGTGAAAGCAG.A.TCCCGGGTTGCC.TTCCCCCTTGGCGT.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGcc < 2:2470928/101‑1 (MQ=25)
a.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCg > 2:906569/1‑101 (MQ=255)
ggTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCGa > 2:4011900/1‑101 (MQ=255)
gtaaacacAG.A.CCCCGGGTCCCT.TTTCCCCTGGGGGC.AAATACCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCGAg < 2:831438/94‑1 (MQ=18)
tGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCGAgc > 2:2629297/1‑101 (MQ=255)
cAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCGAGCGCTCAg > 2:1150789/1‑101 (MQ=255)
cAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCGAGCGCTCAg > 2:1194635/1‑101 (MQ=255)
|
GTGCGCGCGGGCGAGATCTGAGGGCAAGGCGGGGGGCGCTGCCCCCCTCTTGGCCTGACGGCCAATTCACCCCCC.GGGATATTTGGACCAA.GGTGAAAGCAG.A.TCCCGGTTTGCC.TTTCACCTTGGCGC.AAATATCCCGGGGGGAGTCCCGCGGGGACGGGGGGCAGAGCCCCCCTGCCCCCCTGGGGCCGAGCGCTCAGG > NC_014034/3003934‑3004134
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|