Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,239,496 Δ1 bp 100% coding (142/216 nt) RCAP_rcc01170 ← hypothetical protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,239,4960T→.100.0% 780.3 176coding (142/216 nt)RCAP_rcc01170hypothetical protein
Reads supporting (aligned to +/- strand):  new base (79/97):  ref base (0/0):  total (79/97)

Only 100 of 182 total aligned reads displayed.

GCCCAGAATACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGCTGCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCGGGCGG  >  NC_014034/1239402‑1239591
                                                                                              |                                                                                               
  ccAGAATACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGccccc                                                                                        <  2:1396814/101‑1 (MQ=255)
  ccAGAATACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGccccc                                                                                        <  1:836740/101‑1 (MQ=255)
    aGAATACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGccccccc                                                                                      <  1:984271/101‑1 (MQ=255)
    aGAATACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGccccccc                                                                                      <  1:3044292/101‑1 (MQ=255)
     gAATACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCg                                                                                     <  1:19813/101‑1 (MQ=255)
      aaTACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCgg                                                                                    >  1:1009398/1‑101 (MQ=255)
        tACCGACCCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCCTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCt                                                                                  <  1:1674388/101‑1 (MQ=255)
        tACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCt                                                                                  <  2:2483126/101‑1 (MQ=255)
        tACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCt                                                                                  <  1:342400/101‑1 (MQ=255)
         aCCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTg                                                                                 >  1:2480313/1‑101 (MQ=255)
          ccGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTgc                                                                                <  1:2308305/101‑1 (MQ=255)
           cGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTgcg                                                                               <  1:881096/101‑1 (MQ=255)
           cGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTgcg                                                                               <  1:3354516/101‑1 (MQ=255)
           cGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTgcg                                                                               >  1:1264018/1‑101 (MQ=255)
            gAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTgcgc                                                                              >  1:667974/1‑101 (MQ=255)
             aaCCTGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcc                                                                             >  2:2124536/1‑101 (MQ=255)
             aaCCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcc                                                                             >  2:2929151/1‑101 (MQ=255)
             aaCCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcc                                                                             <  1:4048632/101‑1 (MQ=255)
              aCCAGACCAGCTTGCGCATGGACCCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGccc                                                                            <  2:4141628/101‑1 (MQ=255)
               cccGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcccc                                                                           <  2:815153/101‑1 (MQ=255)
                ccGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGccccc                                                                          <  2:2276104/101‑1 (MQ=255)
                 cGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcccccc                                                                         <  1:3280312/101‑1 (MQ=255)
                 cGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcccccc                                                                         >  1:2988504/1‑101 (MQ=255)
                 cGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcccccc                                                                         >  2:1570418/1‑101 (MQ=255)
                 cGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGcccccc                                                                         >  2:4582039/1‑101 (MQ=255)
                  gATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGccccccc                                                                        <  1:2063453/101‑1 (MQ=255)
                  gATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGccccccc                                                                        <  2:3517278/101‑1 (MQ=255)
                  gATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGccccccc                                                                        >  1:3681629/1‑101 (MQ=255)
                   aTCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCg                                                                       >  1:1520464/1‑101 (MQ=255)
                    tCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATGCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCgg                                                                      <  2:2941628/101‑1 (MQ=255)
                     cAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCggg                                                                     <  2:3728504/101‑1 (MQ=255)
                      aGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGa                                                                    >  1:1377777/1‑101 (MQ=255)
                      aGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCCGCGCCCCCCCGGGa                                                                    >  1:2868795/1‑101 (MQ=255)
                       gCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGat                                                                   >  1:1276158/1‑101 (MQ=255)
                       gCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGat                                                                   <  2:714825/101‑1 (MQ=255)
                       gCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGat                                                                   >  1:1802807/1‑101 (MQ=255)
                         ttGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGatat                                                                 <  1:2760390/101‑1 (MQ=255)
                         ttGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGatat                                                                 >  2:2687800/1‑101 (MQ=255)
                         ttGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGatat                                                                 >  2:2381907/1‑101 (MQ=255)
                          tGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATAtt                                                                <  2:4536417/101‑1 (MQ=255)
                          tGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATAtt                                                                <  2:2828283/101‑1 (MQ=255)
                          tGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATAtt                                                                <  1:1063264/101‑1 (MQ=255)
                          tGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGG.AGCTGCCCCCCCAGCTGCGCCCCCCCGGGCTAtt                                                                >  2:1938084/1‑101 (MQ=255)
                            cgcATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTg                                                              <  1:3816805/101‑1 (MQ=255)
                             gcATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGc                                                             >  1:1758102/1‑101 (MQ=255)
                              cATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCa                                                            >  1:4306674/1‑101 (MQ=255)
                              cATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCa                                                            >  1:358731/1‑101 (MQ=255)
                              cATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCa                                                            >  1:1881812/1‑101 (MQ=255)
                               aTGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGccc                                                           >  1:2814930/1‑99 (MQ=255)
                                tGGAACCCTCCGTTTGCGGTATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCAcc                                                          <  2:526209/101‑1 (MQ=255)
                                tGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCAcc                                                          <  1:2338095/101‑1 (MQ=255)
                                   aaCCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAgg                                                       <  1:721004/101‑1 (MQ=255)
                                   aaCCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAgg                                                       >  2:1999456/1‑101 (MQ=255)
                                     cccTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGt                                                     <  1:3845286/101‑1 (MQ=255)
                                       cTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGa                                                   <  2:137955/101‑1 (MQ=255)
                                       cTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGa                                                   >  2:1115726/1‑101 (MQ=255)
                                       cTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGa                                                   >  1:4236379/1‑101 (MQ=255)
                                       cTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGa                                                   >  1:1188621/1‑101 (MQ=255)
                                        tCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGaa                                                  <  2:4125127/101‑1 (MQ=255)
                                         ccGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAAc                                                 >  2:625804/1‑101 (MQ=255)
                                         ccGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAAc                                                 <  2:3559598/101‑1 (MQ=255)
                                          cGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAACGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACg                                                <  1:3974660/101‑1 (MQ=255)
                                           gTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACgg                                               >  2:3917507/1‑101 (MQ=255)
                                                cGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGat                                          <  2:3337731/101‑1 (MQ=255)
                                                cGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGat                                          >  2:1215778/1‑101 (MQ=255)
                                                 ggCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGata                                         <  2:4275309/101‑1 (MQ=255)
                                                   cATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATAtt                                       >  1:3525920/1‑101 (MQ=255)
                                                    aTTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATAttt                                      >  2:3849350/1‑101 (MQ=255)
                                                      tCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGTGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGc                                    <  2:3115077/101‑1 (MQ=255)
                                                      tCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGc                                    <  2:4526346/101‑1 (MQ=255)
                                                        ttGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCg                                  >  1:3891010/1‑101 (MQ=255)
                                                              ccGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACgg                            <  1:947918/101‑1 (MQ=255)
                                                               cGGCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGc                           >  1:474711/1‑101 (MQ=255)
                                                                ggCGCGCAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCCGGGTGAACGGGCGGTATTTGCCGCGACggga                          >  2:846523/1‑99 (MQ=37)
                                                                  cgcgcAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGa                        >  1:2285875/1‑101 (MQ=255)
                                                                  cgcgcAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGa                        >  2:3476063/1‑101 (MQ=255)
                                                                     gcAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACg                     >  2:937250/1‑101 (MQ=255)
                                                                     gcAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACg                     >  2:3003019/1‑101 (MQ=255)
                                                                     gcAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACg                     >  2:2462650/1‑101 (MQ=255)
                                                                     gcAAAAAGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGCGAACGGGCGATATTTGCCGTGACGGCAGAACg                     >  1:616524/1‑101 (MQ=255)
                                                                           aGGCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctt               >  1:656102/1‑101 (MQ=255)
                                                                            ggCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGcttt              >  2:4325063/1‑101 (MQ=255)
                                                                             gCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttc             <  2:358694/101‑1 (MQ=255)
                                                                             gCAACCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttc             <  2:616463/101‑1 (MQ=255)
                                                                                aCCGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttcctt          <  1:4414540/101‑1 (MQ=255)
                                                                                 ccGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttccttt         <  2:3847203/101‑1 (MQ=255)
                                                                                  cGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttcctttc        <  2:1276065/101‑1 (MQ=255)
                                                                                  cGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttcctttc        >  2:1738530/1‑101 (MQ=255)
                                                                                  cGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttcctttc        <  2:1801321/101‑1 (MQ=255)
                                                                                  cGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttcctttc        <  1:937330/101‑1 (MQ=255)
                                                                                  cGGAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGctttcctttc        >  2:2596600/1‑101 (MQ=255)
                                                                                   ggAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCg       >  1:2631952/1‑101 (MQ=255)
                                                                                   ggAGAGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCg       >  1:2234184/1‑101 (MQ=255)
                                                                                    gagaGGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCgg      >  2:2067751/1‑101 (MQ=255)
                                                                                     agagGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCggg     >  2:1006941/1‑101 (MQ=255)
                                                                                      gagGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCGGGc    >  1:3696845/1‑101 (MQ=255)
                                                                                      gagGGGGC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCGGGc    <  2:3673422/101‑1 (MQ=255)
                                                                                      gagGGGGC.GCTCCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCGGGc    <  1:176899/101‑1 (MQ=255)
                                                                                        gggggC.GCTGGCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCGGGCgg  <  2:1970773/101‑1 (MQ=255)
                                                                                        gggggC.GCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGCGACGGCAGAACGGGGCTTTCCTTTCGGGCgg  >  1:1546490/1‑101 (MQ=255)
                                                                                              |                                                                                               
GCCCAGAATACCGAACCCGATCAGCTTGCGCATGGAACCCTCCGTTTGCGGCATTCTTGCGCCCGGCGCGCAAAAAGGCAACCGGAGAGGGGGCTGCTGCCCCCCCGGCTGCGCCCCCCCGGGATATTTGCACCAGGGTGAACGGGCGATATTTGCCGTGACGGCAGAACGGGGCTTTCCTTTCGGGCGG  >  NC_014034/1239402‑1239591

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG