Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 2,757,445 Δ1 bp 2.6% intergenic (+322/‑247) RCAP_rcc02566 → / → RCAP_rcc02567 reverse transcriptase catalytic domain‑containing protein/resolvase

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140342,757,4450C→. 2.6% 4.9 ‑0.5 ‑0.1156intergenic (+322/‑247)RCAP_rcc02566/RCAP_rcc02567reverse transcriptase catalytic domain‑containing protein/resolvase
Reads supporting (aligned to +/- strand):  new base (3/1):  ref base (86/66):  total (89/67)
Fisher's exact test strand distribution p-value = 6.35e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 7.53e-01

Only 100 of 185 total aligned reads displayed.

GGCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCC  >  NC_014034/2757345‑2757544
                                                                                                    |                                                                                                   
ggCCCCCCGCACGGCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGc                                                                                                     <  1:2740392/101‑1 (MQ=255)
    gcccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGccccc                                                                                                 >  1:2880484/1‑101 (MQ=255)
    ccccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGccccc                                                                                                 <  1:3890083/100‑1 (MQ=255)
      ccgcACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGccccccc                                                                                               >  1:1036161/1‑101 (MQ=255)
        gcccGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGccccccccc                                                                                             <  1:2262148/98‑1 (MQ=255)
        gcccGGCAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGccccccccc                                                                                             <  1:4366877/98‑1 (MQ=255)
         ccggccAAGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCg                                                                                            <  1:1732813/96‑1 (MQ=255)
         cccgcaaaGCCCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCg                                                                                            <  2:1029215/95‑1 (MQ=255)
           cGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCggg                                                                                          >  1:1362906/1‑100 (MQ=255)
            ggCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTg                                                                                         <  2:1559169/101‑1 (MQ=255)
              cAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGgc                                                                                       >  2:2481736/1‑101 (MQ=255)
               aaGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGgcc                                                                                      >  1:4311645/1‑101 (MQ=255)
               aaGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGgcc                                                                                      <  1:4569507/101‑1 (MQ=255)
                    ccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGccgcccg                                                                                 <  2:300948/101‑1 (MQ=255)
                    ccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGccgcccg                                                                                 <  2:2479360/101‑1 (MQ=255)
                    ccAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGccgcccg                                                                                 <  1:3125383/101‑1 (MQ=255)
                      aGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCACCCCCCCCCCGGTGGCcgcccgcc                                                                               <  2:3082765/101‑1 (MQ=255)
                        ccGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCt                                                                             <  2:2548013/101‑1 (MQ=255)
                        ccGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCt                                                                             <  2:2184958/101‑1 (MQ=255)
                        ccGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCCGTGGCCgcccgcccc                                                                             >  2:2607014/1‑100 (MQ=255)
                             aaaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGcc                                                                        >  2:2630173/1‑101 (MQ=255)
                              aaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGGGGCCGCCCACCCTGGGcac                                                                       >  2:3513427/1‑99 (MQ=255)
                              aaGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCCCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGCGGCGGCCCCCCCCCGGccc                                                                       >  1:457386/1‑101 (MQ=255)
                              aaGCGATCAGGGCCGCATATTTTGGCGGAAAAACCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGccc                                                                       <  2:1319353/101‑1 (MQ=255)
                               aGCGATCAGGCCCCGATATTTTGGCGGAAAAATCCGAGCCCCCCCCTCGACCGAAGTGCAGCCGCGCCGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCg                                                                      <  2:204548/101‑1 (MQ=255)
                                 cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    <  1:4021299/101‑1 (MQ=255)
                                 cGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGtt                                                                    >  1:1117088/1‑101 (MQ=255)
                                  gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTc                                                                   >  2:2244733/1‑101 (MQ=255)
                                  gATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTc                                                                   >  1:1495718/1‑101 (MQ=255)
                                   aTCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCCGGGGCCCCCCCCCCCCGGccccgtcc                                                                  >  1:2230921/1‑96 (MQ=255)
                                    tCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAg                                                                 <  2:3736150/101‑1 (MQ=255)
                                      aGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGt                                                               <  1:2332892/101‑1 (MQ=255)
                                      aGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGt                                                               <  2:2751616/101‑1 (MQ=255)
                                       gggCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTc                                                              <  2:2880268/101‑1 (MQ=255)
                                        ggCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCg                                                             <  1:3705893/101‑1 (MQ=255)
                                         gCCGCATATTTTGGCGGAAAAATCCGAGCCCCCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGc                                                            <  1:1027390/101‑1 (MQ=255)
                                           cGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGccc                                                          >  2:2526575/1‑101 (MQ=255)
                                            gCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCa                                                         >  2:2828292/1‑101 (MQ=255)
                                            gCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGGCGCCCa                                                         >  1:86392/1‑101 (MQ=255)
                                             cATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAg                                                        >  1:3616048/1‑101 (MQ=255)
                                             cATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAg                                                        <  1:3430225/101‑1 (MQ=255)
                                                atTTTGGCGGAAAAATCCGAGCCACCCCCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCAc                                                     <  1:4495293/101‑1 (MQ=255)
                                                atTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCAc                                                     >  2:4080396/1‑101 (MQ=255)
                                                   ttGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCt                                                  <  2:3165238/101‑1 (MQ=255)
                                                    tGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCCCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTc                                                 >  1:205204/1‑101 (MQ=255)
                                                     ggCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTcc                                                <  1:1825765/101‑1 (MQ=255)
                                                     ggCGAAAAAACACAACCCTCCACCTCGACCGACGGGCAGCCGCGCGGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTcc                                                <  2:1193537/101‑1 (MQ=255)
                                                       cGGAAAAACCCGAGCCACCCCCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCg                                              <  1:3588893/101‑1 (MQ=255)
                                                        ggAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGa                                             >  1:1459401/1‑101 (MQ=255)
                                                         gAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCgcg                                            >  2:135729/1‑99 (MQ=255)
                                                          aaaaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAgg                                           >  1:1217029/1‑101 (MQ=255)
                                                          aaaaaCCCGAGCCCCCCCCCCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAgg                                           <  1:2356086/101‑1 (MQ=255)
                                                           aaaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgc                                          >  2:3987560/1‑101 (MQ=255)
                                                           aaaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgc                                          <  1:3007045/101‑1 (MQ=255)
                                                            aaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgcc                                         >  2:3913605/1‑101 (MQ=255)
                                                            aaaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgcc                                         <  1:2481902/101‑1 (MQ=255)
                                                             aaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGgccg                                        >  2:2959241/1‑101 (MQ=255)
                                                             aaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCCAGgccg                                        >  1:4155166/1‑101 (MQ=255)
                                                             aaTCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGCTCCGGGCGCCCAGCACGCCCCCCACgccc                                        >  1:1618015/1‑100 (MQ=255)
                                                               tCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCCCGCTCCCGAGgccgcc                                      >  1:1760344/1‑101 (MQ=255)
                                                                ccGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCCCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGccc                                     >  1:1173492/1‑101 (MQ=255)
                                                                  gAGCCCCCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  1:42329/101‑1 (MQ=255)
                                                                  gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:4627576/101‑1 (MQ=255)
                                                                  gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   <  2:1757624/101‑1 (MQ=255)
                                                                  gAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCa                                   >  1:1519779/1‑101 (MQ=255)
                                                                   aGCCACCCCCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAg                                  <  2:731145/101‑1 (MQ=255)
                                                                       gccaccTCCACCGAAGTGCAGCCGCGCGGCCCCCCCCCGGTGGCCTCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCGCGCTCCCGAGGCCGCCCCAGcgcc                              <  2:457349/100‑1 (MQ=255)
                                                                       accaccTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCCGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGcgcc                              >  1:575690/1‑101 (MQ=255)
                                                                          accTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCgccgcc                           >  1:1637432/1‑101 (MQ=255)
                                                                          accTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCgccgcc                           <  2:521225/101‑1 (MQ=255)
                                                                            cccGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGcccc                         <  1:2850177/99‑1 (MQ=255)
                                                                             tCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCt                        >  1:2192189/1‑101 (MQ=255)
                                                                              cGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGGCCTGGGCCCGTTCAGGTCGTCCAGCACGAACCCGAGGGCCCCCCAGCGCCGcccccc                       >  2:2074244/1‑99 (MQ=255)
                                                                              cGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTc                       <  2:3097587/101‑1 (MQ=255)
                                                                                aCCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTccc                     <  2:1935881/101‑1 (MQ=255)
                                                                                 ccGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGCGGCCGCCCCCGCGCCGCCCCTcccc                    >  2:963945/1‑100 (MQ=255)
                                                                                 ccGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCg                    <  2:3511998/101‑1 (MQ=255)
                                                                                 ccGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCCCCGCCCCTcccc                    >  2:3622354/1‑100 (MQ=255)
                                                                                   gAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGcc                  >  1:1676319/1‑101 (MQ=255)
                                                                                   gAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGcc                  >  2:3323047/1‑101 (MQ=255)
                                                                                    aaGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCCCCCCccc                 >  1:928919/1‑100 (MQ=255)
                                                                                     aGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCCCCCTGGGCCCGTTCAGGTCCCCCAGCACGCTCCCGAGGCCCCCCCAGCGCCGCCCCCCCCCcccc                >  1:3290700/1‑99 (MQ=255)
                                                                                      gTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcc               <  1:1904060/101‑1 (MQ=255)
                                                                                      gTGCAGCCGCGCAGCCCCCCCACGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcc               >  1:2644698/1‑101 (MQ=255)
                                                                                        gCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCAcccc             >  1:4262171/1‑101 (MQ=255)
                                                                                         taGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCg            <  1:3216550/100‑1 (MQ=255)
                                                                                         cAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCg            >  2:1626921/1‑101 (MQ=255)
                                                                                          aGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCGCCCCgg           >  1:772424/1‑101 (MQ=255)
                                                                                          aGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCCCCGCCCCCCCCCCCAccccca           >  2:3216307/1‑99 (MQ=255)
                                                                                          aGCCGCGCAGCCCCCCCCCGGGGGCCCCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACCCCCCCGAGGCCGCCCCCGCGCCGCCCCCCCCCCCCCCCCgc           >  1:2898833/1‑100 (MQ=255)
                                                                                          aGCCGCGCAG.CCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGc          >  2:2362698/1‑101 (MQ=255)
                                                                                              ccgcAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCAcc       <  2:1649154/100‑1 (MQ=255)
                                                                                                gcAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctc     <  1:3650522/101‑1 (MQ=255)
                                                                                                 ccacccccccccGGTGCCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctct    <  2:4556874/98‑1 (MQ=255)
                                                                                                  accccccccccGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCtctc   <  2:337510/99‑1 (MQ=255)
                                                                                                  aGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCCCCCCGGCACCtctc   >  1:4447026/1‑101 (MQ=255)
                                                                                                  aGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACctccc   >  2:1187116/1‑99 (MQ=255)
                                                                                                  aGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCtctc   <  2:1216937/101‑1 (MQ=255)
                                                                                                  aGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCtctc   <  2:1292187/101‑1 (MQ=255)
                                                                                                   gCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTcc  <  2:655715/101‑1 (MQ=255)
                                                                                                    |                                                                                                   
GGCCGCCCGCACGGCAAGCGCCAGCCGCAAAAGCGATCAGGGCCGCATATTTTGGCGGAAAAATCCGAGCCACCACCTCGACCGAAGTGCAGCCGCGCAGCCCCCCCCCGGTGGCCGCCCGCCCTGGGCCCGTTCAGGTCGCCCAGCACGCTCCCGAGGCCGCCCCAGCGCCGCCCCTCCCGCCACCCCGGCACCTCTCC  >  NC_014034/2757345‑2757544

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG