Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 432,463 Δ1 bp 4.0% intergenic (+66/+82) RCAP_rcc00403 → / ← RCAP_rcc00404 hypothetical protein/Sua5/YciO/YrdC/YwlC family protein

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_014034432,4630A→. 4.0% 13.2 ‑3.2 ‑0.2177intergenic (+66/+82)RCAP_rcc00403/RCAP_rcc00404hypothetical protein/Sua5/YciO/YrdC/YwlC family protein
Reads supporting (aligned to +/- strand):  new base (6/1):  ref base (69/101):  total (75/102)
Fisher's exact test strand distribution p-value = 4.28e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.21e-01

Only 100 of 202 total aligned reads displayed.

GCGCACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGT.CTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGCG  >  NC_014034/432364‑432563
                                                                                                     |                                                                                                      
gcgcACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGaaa                                                                                                        <  2:1274440/101‑1 (MQ=255)
gcgcACGCTTGCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGaaa                                                                                                        <  1:3907202/101‑1 (MQ=255)
   cACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGcc                                                                                                     <  2:3572371/101‑1 (MQ=255)
    gcGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCg                                                                                                    <  2:4442502/100‑1 (MQ=255)
    aCGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGGT.ATTTTTAGCAAGATGGAAggac                                                                                                    >  2:833919/1‑98 (MQ=18)
    aCGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCg                                                                                                    <  2:1598431/101‑1 (MQ=255)
       cTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATc                                                                                                 <  2:618995/101‑1 (MQ=255)
       cTTGCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATc                                                                                                 <  2:1974829/101‑1 (MQ=255)
        tttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATcc                                                                                                <  2:3356647/101‑1 (MQ=255)
             gcggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGCCTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCt                                                                                           >  1:1804970/1‑101 (MQ=255)
             gcggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCCAGATGAAAGCCGATCCGGGCt                                                                                           <  1:3433570/101‑1 (MQ=255)
              cggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCtt                                                                                          >  2:250936/1‑101 (MQ=255)
                gcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCg                                                                                        <  2:2373731/101‑1 (MQ=255)
                 cggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGt                                                                                       >  2:4520429/1‑101 (MQ=255)
                  ggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGGAAAATGAAAGACGGTCCggggcttggt                                                                                      >  1:38039/1‑94 (MQ=17)
                  ggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGtt                                                                                      <  2:3735403/101‑1 (MQ=255)
                   gcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGttt                                                                                     <  1:2792080/101‑1 (MQ=255)
                   gcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGttt                                                                                     <  1:1638360/101‑1 (MQ=255)
                    cggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTc                                                                                    <  2:869401/101‑1 (MQ=255)
                        ccACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.t                                                                               <  2:1574779/101‑1 (MQ=255)
                        ccACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.t                                                                               <  1:1954685/101‑1 (MQ=255)
                         cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.tt                                                                              <  1:2718539/101‑1 (MQ=255)
                         cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.tt                                                                              <  1:1474658/101‑1 (MQ=255)
                         cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.tt                                                                              <  1:333529/101‑1 (MQ=255)
                         cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.tt                                                                              <  1:3752183/101‑1 (MQ=255)
                           cGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.Gc                                                                           <  1:4167960/101‑1 (MQ=255)
                            gCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.Gcc                                                                          <  1:68002/101‑1 (MQ=255)
                               tGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCa                                                                       >  2:1021115/1‑101 (MQ=255)
                               tGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAAATGAAAGACGGTCCGGGCTTCGTTTCATC.TT.GCCCCa                                                                       >  2:3248387/1‑101 (MQ=18)
                                gAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCaa                                                                      >  1:161997/1‑101 (MQ=255)
                                 aGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGGTAATTTAAGGAAAAATAAAACCGGACCGGGGCTTCGTTT.ATCTTT.GCCCCaa                                                                      >  2:3207103/1‑101 (MQ=2)
                                 aGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCaaa                                                                     >  1:4534122/1‑101 (MQ=255)
                                 aGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCaaa                                                                     <  2:1736919/101‑1 (MQ=255)
                                  ggCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGGTTCGTTTCATC.TT.GCCCCAAat                                                                    <  2:2939540/101‑1 (MQ=255)
                                  ggCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAat                                                                    <  2:2621547/101‑1 (MQ=255)
                                   gCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAata                                                                   <  1:4201899/101‑1 (MQ=255)
                                   gCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAata                                                                   <  2:3487981/101‑1 (MQ=255)
                                     cGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATc                                                                 >  1:2735875/1‑101 (MQ=255)
                                      gggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATcc                                                                >  1:3722448/1‑101 (MQ=255)
                                      gggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATcc                                                                >  1:4312483/1‑101 (MQ=255)
                                      gggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATcc                                                                <  1:2185617/101‑1 (MQ=255)
                                      gggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAG.ATTTGAGGGAAGATGAAAGCCGATCAGGGCTTCTTTTCATC.TT.CACCCAAAAATcc                                                                >  1:3011440/1‑101 (MQ=18)
                                        gacggggggCTCTGCCCCCCGG.CTTCG..CTCCCCCCGGGAT.ATTTGCGGCAAGATGAA....G....GGGCATGATTTCATC.TT.GCCCGAAATATCCCAGGGGTGAAttg                                                   >  1:2388947/4‑100 (MQ=2)
                                        gacggggggCTCTGCCCCCCGG.CTTCG..CTCCCCCCGGGAT.ATTTGCGGCAAGATGAA....G....GGGCATGATTTCATC.TT.GCCCGAAATATCCCAGGGGTGAAttg                                                   >  1:3063551/4‑100 (MQ=2)
                                        gCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCg                                                              <  1:19822/101‑1 (MQ=255)
                                         acggggggCTCTGCCCCCCGG.CTTCG..CTCCCCCCGGGAT.ATTTGCGGCAAGATGAA....G....GGGCATGATTTCATC.TT.GCCCGAAATATCCCAGGGGTGAAttgg                                                  >  1:2229861/3‑99 (MQ=2)
                                          cggggggCTCTGCCCCCCGG.CTTCG..CTCCCCCCGGGAT.ATTTGCGGCAAGATGAA....G....GGGCATGATTTCATC.TT.GCCCGAAATATCCCAGGGGTGAAttggc                                                 >  2:4559270/2‑98 (MQ=2)
                                          aGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAATCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCggg                                                            >  2:4638799/1‑101 (MQ=255)
                                          aGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCggg                                                            >  1:486387/1‑101 (MQ=255)
                                              gggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTg                                                        <  2:1475165/101‑1 (MQ=255)
                                               ggCGCCGCCCCCCGTCCTGCGGCCTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGa                                                       <  2:757808/101‑1 (MQ=25)
                                                 cgcTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAAt                                                     <  2:2824239/101‑1 (MQ=255)
                                                  ccTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAAtt                                                    <  2:2867068/100‑1 (MQ=255)
                                                   cTGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAAttt                                                   <  1:3269642/101‑1 (MQ=255)
                                                    tGCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAAtttt                                                  >  2:4164595/1‑101 (MQ=255)
                                                     gCCCCCCGTCCTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTg                                                 >  1:4387358/1‑101 (MQ=255)
                                                      ccccccGTCCTGCGGACCCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTgg                                                <  2:4189086/101‑1 (MQ=255)
                                                        ccccGTCCTGCGGACTCCCCCCGGGAT.ATTTTAGGGAAGAAGAAAACCGATCCCGGGCTCGTTTCATC.TTGGCCCAAAAAATCCCGGGGGGGAGTTTTgcg                                               >  2:3973020/1‑99 (MQ=12)
                                                           cgtccTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTTgcgccg                                           >  1:157086/5‑99 (MQ=255)
                                                              ccTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCa                                        <  1:4351667/100‑1 (MQ=255)
                                                              ccTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCa                                        >  1:1532915/2‑101 (MQ=255)
                                                                tGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCaaa                                      <  2:1628959/101‑1 (MQ=255)
                                                                tGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCaaa                                      <  2:2013252/101‑1 (MQ=255)
                                                                 gCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCaaaa                                     <  1:4290940/101‑1 (MQ=255)
                                                                   ggACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAaga                                   >  1:2011061/1‑101 (MQ=255)
                                                                    gACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAagag                                  >  1:2293202/1‑101 (MQ=255)
                                                                    gACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAagag                                  <  2:3018378/101‑1 (MQ=255)
                                                                    gACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAagag                                  <  1:833995/101‑1 (MQ=255)
                                                                     aCTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAgg                                 >  1:4662428/1‑101 (MQ=255)
                                                                     aCTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAgg                                 <  2:389526/101‑1 (MQ=255)
                                                                       tCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAgggg                               <  1:4639100/101‑1 (MQ=255)
                                                                       tCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAgggg                               <  2:4289789/101‑1 (MQ=255)
                                                                        ccccccGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAggggg                              >  2:1787468/1‑101 (MQ=255)
                                                                         cccccGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGc                             <  2:2743097/101‑1 (MQ=255)
                                                                          ccccGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCa                            >  2:3830828/1‑101 (MQ=255)
                                                                           cccGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCTTTTCATA.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGTGGCAg                           >  2:1509760/1‑101 (MQ=255)
                                                                           cccGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGGGAATTTTGGCGCAGCCAAAAGAGGGGGCAg                           >  2:783530/1‑101 (MQ=255)
                                                                             cGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgcg                         >  2:2521322/1‑101 (MQ=255)
                                                                              gggAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgcgc                        >  2:2174067/1‑101 (MQ=255)
                                                                               ggAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgcgcg                       <  1:4588656/101‑2 (MQ=255)
                                                                                gAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccc                      >  1:4047097/1‑101 (MQ=255)
                                                                                 at.atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcccc                     <  1:2973486/101‑1 (MQ=255)
                                                                                 at.atTTGAGGCAAGATGAAAACCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcccc                     >  2:595535/1‑101 (MQ=255)
                                                                                  t.atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccccc                    >  1:2873087/1‑101 (MQ=255)
                                                                                    atTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt                   <  1:1769233/101‑1 (MQ=255)
                                                                                     tttGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTa                  >  1:1184163/1‑101 (MQ=255)
                                                                                     tttGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTa                  >  1:1121381/1‑101 (MQ=255)
                                                                                      ttGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTAt                 >  2:168727/1‑101 (MQ=255)
                                                                                         aGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATccc              >  1:2836223/1‑101 (MQ=255)
                                                                                          ggCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATcccc             <  2:332713/101‑1 (MQ=255)
                                                                                           gCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcg            >  2:2731098/1‑101 (MQ=255)
                                                                                             aaGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcg          >  1:1025979/1‑101 (MQ=255)
                                                                                              aGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcgg         >  1:855383/1‑101 (MQ=255)
                                                                                               gaggAAAGCCGATCCGGGCTTCGTTTCATC.TT.TCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggc        <  2:4400977/98‑1 (MQ=255)
                                                                                                   aaaGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggcgcgg    >  2:2052682/1‑101 (MQ=255)
                                                                                                   aaaGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggagcgg    >  2:631590/1‑101 (MQ=255)
                                                                                                    aaGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggc   >  2:1058500/1‑101 (MQ=255)
                                                                                                    aaGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggc   >  1:1878708/1‑101 (MQ=255)
                                                                                                     aGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggcg  >  2:4251532/1‑101 (MQ=255)
                                                                                                     aGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggcg  <  2:3251377/101‑1 (MQ=255)
                                                                                                     |                                                                                                      
GCGCACGCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGT.CTGCGGACTCCCCCCGGGAT.ATTTGAGGCAAGATGAAAGCCGATCCGGGCTTCGTTTCATC.TT.GCCCCAAATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGCG  >  NC_014034/432364‑432563

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG