| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,057,825 | +C | 83.1% | intergenic (‑591/‑311) | RCAP_rcc01900 ← / → RCAP_rcc01901 | hemolysin‑type calcium‑binding repeat family protein/polyphosphate kinase 2 domain‑containing protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,057,825 | 1 | .→C | 83.1% | 96.5 ‑1.8 ‑0.9 | 177 | intergenic (‑591/‑311) | RCAP_rcc01900/RCAP_rcc01901 | hemolysin‑type calcium‑binding repeat family protein/polyphosphate kinase 2 domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (67/80): ref base (18/12): total (85/92) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.65e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.34e-01 | ||||||||||
Only 100 of 204 total aligned reads displayed.
AAAATTTGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC.GCG.CGC.AGC.G.TTCCGAACCGGCATCAATC.TTGG.CCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAAGC > NC_014034/2057725‑2057913
|
aaaaTTTGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.t < 1:2997047/101‑1 (MQ=255)
aaaaTTTGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.t > 1:2380071/1‑101 (MQ=255)
aTTTGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.ccc < 2:2037652/101‑2 (MQ=255)
aTTTGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.ccc < 2:2377755/101‑2 (MQ=255)
tttGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.cccg > 1:2133256/1‑99 (MQ=255)
tttGTCCTGTTTACCGCCCATTAACCCTGCGTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.cccg > 2:2223037/1‑99 (MQ=255)
ttGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.cccgc < 1:461104/101‑4 (MQ=255)
ttGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.cccgc < 2:4299529/101‑4 (MQ=255)
ttGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.cccgc < 2:2587203/101‑4 (MQ=255)
gTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.Cc..cg.cgc > 2:1352375/1‑101 (MQ=255)
gTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.Cc..cg.cgc > 2:740919/1‑101 (MQ=255)
cTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACCA.T.CC..CG.CGC.CGc > 2:3568007/1‑101 (MQ=255)
cTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGc > 2:43422/1‑101 (MQ=255)
tGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGca > 2:3847637/1‑100 (MQ=255)
gTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaa > 1:3479686/1‑99 (MQ=255)
tttACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaag < 2:118209/101‑4 (MQ=255)
tttACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaag > 2:1547553/1‑98 (MQ=255)
aCCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaagcgt > 1:4069879/1‑95 (MQ=255)
aCCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaagcgt > 1:3974896/1‑95 (MQ=255)
ccGCCCATTCACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaagcgtt < 2:1511619/101‑8 (MQ=255)
gCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaagcgtttc > 2:367370/1‑92 (MQ=255)
gCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC..CG.CGC.CGcaagcgtttc > 2:2456417/1‑92 (MQ=255)
aaCCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCg > 2:2732235/1‑101 (MQ=255)
aCCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCgg < 1:3510572/101‑1 (MQ=255)
cccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGc < 2:104644/101‑1 (MQ=255)
cccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGc < 1:172233/101‑1 (MQ=255)
ccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCa < 2:2111029/101‑1 (MQ=255)
cTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCAt < 1:3801487/101‑1 (MQ=255)
tGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATc < 2:3780269/101‑1 (MQ=255)
gCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCa > 2:3918317/1‑101 (MQ=255)
cTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCTACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCat > 1:1507914/1‑100 (MQ=255)
cTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCat < 1:2654415/101‑2 (MQ=255)
cTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCCGCGTTTCCGGATTGGCGTCAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCat < 1:1425074/101‑2 (MQ=255)
ttCGGCGCGCGGACTTCGGGGTGGTGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCatt < 1:2899097/101‑3 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCatt < 2:3721401/101‑3 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCCGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCatt < 1:2364552/101‑3 (MQ=255)
tCGGGGGGCCGACTTCGGGGCGGCGGGGGGGATCTTGCGGTCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTc < 2:1196421/101‑1 (MQ=255)
cGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.t < 1:1559179/101‑1 (MQ=255)
cGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.t > 1:3731874/1‑101 (MQ=255)
gcgcgcGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTg < 2:705379/101‑1 (MQ=255)
gcgcgcGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTg < 1:2752578/101‑1 (MQ=255)
gcgcgcGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTg < 1:1060503/101‑1 (MQ=255)
gcgcgGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.c < 2:760742/101‑1 (MQ=255)
cgGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.cccc > 1:2325392/1‑101 (MQ=255)
cgGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.cccc < 1:826225/101‑1 (MQ=255)
gACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.cccccc < 2:1771631/101‑2 (MQ=255)
gACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.cccccc < 1:3847922/101‑2 (MQ=255)
aCTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.ccccccg > 2:3070965/1‑99 (MQ=255)
aCTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.ccccccg < 2:4197704/101‑3 (MQ=255)
cTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.ccccccgc < 1:1860206/101‑4 (MQ=255)
ttCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.ccccccgcc < 1:2116955/101‑5 (MQ=255)
ttCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.CCCcccccc > 1:3627784/1‑100 (MQ=255)
tCGGGGGGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATGGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.ccccccgccg < 2:2907565/101‑6 (MQ=255)
tCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGG.ccccccgccg < 2:2249732/101‑6 (MQ=255)
ggggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCggg < 2:553382/101‑1 (MQ=255)
ggggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCggg > 2:1406130/1‑101 (MQ=255)
ggggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCggg > 1:3057085/1‑101 (MQ=255)
gggCGGCGGCGGGGCTCTTGCTATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCACCATTCTTTGC.CCCCCGCCGGGa < 2:1380751/101‑1 (MQ=255)
gggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGa < 1:740994/101‑1 (MQ=255)
gggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGa < 1:1352470/101‑1 (MQ=255)
ggcggcggcGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGAc < 2:254679/101‑1 (MQ=255)
gcggcggcgGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACa < 2:4505798/101‑1 (MQ=255)
gcggcggcgGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACa < 1:2683023/101‑1 (MQ=255)
cggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCa < 1:1898634/101‑1 (MQ=255)
ggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCAc > 1:4538589/1‑101 (MQ=255)
ggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCAc < 1:956098/101‑1 (MQ=255)
gcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACg < 1:630600/101‑1 (MQ=255)
gcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACg < 1:2553074/101‑1 (MQ=255)
cggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGA.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACgg > 2:318126/1‑101 (MQ=255)
gggCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGgcc < 1:4189371/101‑1 (MQ=255)
ggCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGgccg > 2:1761181/1‑101 (MQ=255)
gCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGgccgc > 2:1945221/1‑101 (MQ=255)
gCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCACCGGGACAATCACGgccgc > 1:1660748/1‑101 (MQ=255)
tctTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCt > 1:2533047/1‑101 (MQ=255)
ctTGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTc > 1:904289/1‑101 (MQ=255)
tGCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCAt > 2:1648723/1‑101 (MQ=255)
gCGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCAtt < 2:820410/101‑1 (MQ=255)
cGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTg > 2:3392888/1‑101 (MQ=255)
cGATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTg > 1:3661469/1‑101 (MQ=255)
gATCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGt > 2:4313824/1‑101 (MQ=255)
aTCCTGCGTTTCCGGATTGGCGACAA.TCCC.CCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGtt < 1:1547658/101‑1 (MQ=255)
tCCTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTc < 1:2193385/101‑1 (MQ=255)
ccTGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTcc > 2:3826536/1‑101 (MQ=255)
cTGGGTTTCCGGATTGGCGACAA.T.CCAGCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCg < 2:571415/101‑1 (MQ=255)
tGCGTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGc > 1:2223319/1‑101 (MQ=255)
gCGTGTCCGGATGGGCGACAACC.CC.GCGCCGCAAGCGG.TTCCGAACCGGCGTCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGcc < 2:4625734/101‑1 (MQ=255)
gTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCGGCCAt > 2:3751949/1‑101 (MQ=255)
gTTTCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAt < 2:4405878/101‑1 (MQ=255)
tttCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAtt < 2:3661201/101‑1 (MQ=255)
ttCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCCTCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTg < 2:2157610/101‑1 (MQ=255)
tCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCTAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGc < 1:3248079/101‑1 (MQ=255)
tCCGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGc > 2:4067450/1‑101 (MQ=255)
cGGATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGa > 1:3788859/1‑101 (MQ=255)
ggATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGAt > 2:2964413/1‑101 (MQ=255)
ggATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGAt > 1:4493889/1‑101 (MQ=255)
gATTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATc > 2:4578295/1‑101 (MQ=255)
aTTGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCa > 1:4395996/1‑101 (MQ=255)
ttGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaa > 2:2285689/1‑101 (MQ=255)
tGGCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaaa < 1:43428/101‑1 (MQ=255)
ggCGACAA.TCCC.GCGCCGCAAGC.GTTTCCGAACCGGCATCATTC.TTGGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAAg < 1:2487176/101‑1 (MQ=255)
|
AAAATTTGTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAA.T.CC.GCG.CGC.AGC.G.TTCCGAACCGGCATCAATC.TTGG.CCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAAGC > NC_014034/2057725‑2057913
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|