| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,389 | +C | 3.1% | intergenic (‑185/‑120) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,389 | 1 | .→C | 3.1% | 7.1 ‑4.2 0.0 | 161 | intergenic (‑185/‑120) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (0/5): ref base (90/66): total (90/71) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.54e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 193 total aligned reads displayed.
CGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCC > NC_014034/2249289‑2249486
|
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 1:2241603/101‑1 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg < 2:454360/101‑1 (MQ=255)
gtGCCGGGACT.CCCCTGCGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.c < 1:3869997/101‑1 (MQ=255)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg < 2:4216260/101‑1 (MQ=255)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAg.cg..c > 2:594752/1‑101 (MQ=255)
ccGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc < 2:4312041/101‑1 (MQ=255)
ccgggctcccccaGGGATATTTGAGGCAAGATGAG...GGGG..G..GCTTTCATCTTGACGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc < 1:739917/93‑1 (MQ=25)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.c > 2:3060633/1‑101 (MQ=255)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.c < 2:4022810/101‑1 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.cc > 1:4100865/1‑101 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.cc > 2:2321797/1‑101 (MQ=255)
cggccT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.cc < 2:3154963/97‑1 (MQ=255)
cggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..G..CCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.cg < 1:2545834/100‑1 (MQ=18)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..G..CCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAg.cg..c < 1:2451327/101‑1 (MQ=17)
gactccccccGGGATATTTGCAGCAAGATGAAACCGGAT..G..CCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGGCAG.CC..cc < 1:3450227/96‑1 (MQ=17)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.cccct > 1:3062505/1‑99 (MQ=255)
aCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGACGGGGGCGG.CG..cc.cccct > 2:3064665/1‑99 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.ccccttc < 1:3700401/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.ccccttc > 2:157834/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.ccccttc < 2:741661/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.ccccttc < 1:1780179/101‑5 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..cc.ccccttcg < 2:1288833/101‑6 (MQ=255)
cccccGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGGGCA..GCCAGAGGGGGGCAG.CG..cc.ccccttcg > 2:3336467/1‑96 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCAT..GATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CC.CCC..tgc > 2:1905000/1‑99 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGGCAT..GATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CC.CCC..tgccc > 2:3971647/1‑97 (MQ=0)
cGGGATATTTGCGGCAAGATGAA...GGGG..CATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CC.CCC..tgccc > 1:3361751/1‑97 (MQ=0)
cGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCgcggg > 1:1804492/1‑101 (MQ=255)
gggATATTTGCGGCAAGATGAA...GGGGCAT..GATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CC.CCC..tgcccc > 2:3008472/1‑96 (MQ=2)
gggATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCgcgggc > 1:3520456/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCgcgggcg > 1:2624461/1‑101 (MQ=255)
atatTTGCGGCAAAATGAA...GGGGCAT..GATTTCATCTTGCCCAAAATATCCC.GGGGGTGAATTGGCCAAAGGCCAAGAGGGGGCAG.CG..CC.CCC..tgccccgcc < 2:1006226/101‑9 (MQ=9)
atTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCcg < 2:227603/101‑1 (MQ=255)
ttGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCcgcg > 2:3916653/1‑101 (MQ=255)
ttaGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGa < 2:2773756/99‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGa < 2:3821064/101‑1 (MQ=255)
cAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.AGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCTTGCGGCCGCGAcgcgc > 1:779436/1‑101 (MQ=25)
aaGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGAcgcgcc > 1:516387/1‑100 (MQ=255)
aGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGCCgcgcgc > 1:4456455/1‑101 (MQ=255)
aGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACgcgcgc > 1:3308320/1‑101 (MQ=255)
gATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGcgcc > 2:1985429/1‑101 (MQ=255)
gATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGcgcc > 2:2469247/1‑101 (MQ=255)
gATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGcgcc < 1:2975977/101‑1 (MQ=255)
aa...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGAGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:3556136/1‑101 (MQ=255)
gggg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAG.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa > 1:4271465/1‑101 (MQ=255)
gggg..g..gCTTTCATCTTGCCGAAAATAGCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACa < 1:4622264/101‑1 (MQ=255)
ggg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:124686/1‑101 (MQ=255)
ggg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:3794724/1‑101 (MQ=255)
ggg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 2:2431284/1‑101 (MQ=255)
gg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg < 2:4111817/101‑1 (MQ=255)
gg..g..gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAgg < 1:2115580/101‑1 (MQ=255)
cTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt > 1:4052644/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:321237/101‑1 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:4387094/101‑1 (MQ=255)
tttCATCTTGCAGAAAATACCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGGCCGCCC..CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 1:943922/101‑1 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc > 1:1385125/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc < 1:4206859/101‑1 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:2855236/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGccc > 1:4154009/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCCCAACAGGTCGTGccc > 2:1122348/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGGGAA.TGGGGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGGGcccc > 2:1368781/1‑101 (MQ=25)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:2570841/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:3628035/101‑1 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt > 2:2635338/1‑101 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa < 2:3694959/101‑1 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 1:1066059/1‑101 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt < 1:2321959/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 1:682579/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt > 1:3955649/1‑101 (MQ=255)
aattcgccaggggggGGAG.TGCGGCA..GCGAGCGGGGGGCAC.CGC.CC.CCC..TCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc < 1:203184/92‑1 (MQ=255)
aagcccgtggggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:594813/93‑1 (MQ=38)
aaTGTCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:4579511/101‑1 (MQ=255)
tatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGt > 2:3475903/1‑101 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:388471/1‑101 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGAGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:1807724/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 1:644304/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg > 1:1978177/1‑101 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:1147735/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt > 2:2807285/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 2:649149/101‑1 (MQ=255)
gggCGCA..GCGAGGGGGGGGCAGCCC..CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:157848/100‑1 (MQ=255)
gCCAGGGGGGGGCCC.CGCCCC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGc < 1:1658215/101‑1 (MQ=255)
ccggagGGGGGCAGCCC..CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg < 1:1049738/98‑1 (MQ=255)
ccAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCg > 2:612521/1‑101 (MQ=255)
cAGAGGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGc > 2:2580717/1‑101 (MQ=255)
agagGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:897599/1‑101 (MQ=255)
agagGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:4287808/1‑101 (MQ=255)
agagGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:3520522/1‑101 (MQ=255)
gagGGGGGCAGCCC..CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt < 1:3375958/101‑1 (MQ=255)
gagGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt < 1:349240/101‑1 (MQ=255)
gagGGGGGCAG.CG..CC.CCCCTTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa < 2:1649322/101‑1 (MQ=255)
gggggggCGG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 2:1586010/100‑1 (MQ=255)
agGGGGGCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 1:3819061/101‑1 (MQ=255)
gggggCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGa > 1:526913/1‑101 (MQ=255)
ggggCAG.CG..CCACCC..TTCGCGGGCGGCCGCGACGTGCGCGGCAACAGGTCGTGCCCCTTTGACATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt > 1:3851508/1‑101 (MQ=255)
gcggCAG.CGC.CC.CCC..TGCGCGGGCGGCCCCGCCGCGCGCCGCACCAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGAt < 2:516339/99‑1 (MQ=255)
gggCAG.CCC.CC.CCC..TCCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATg < 1:1736739/101‑1 (MQ=255)
ggCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGt < 2:4234862/101‑1 (MQ=255)
ggCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGt < 2:2095963/101‑1 (MQ=255)
ggCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGt < 2:2965618/101‑1 (MQ=255)
gCAG.CGC.CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTc < 2:3412910/101‑1 (MQ=255)
|
CGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..G..GCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGCAG.CG..CC.CCC..TTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATCGATGTCC > NC_014034/2249289‑2249486
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|