New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1016332217 (0.980)2 (0.010) 2/186 37.3 0.01 coding (1831/3972 nt) RCAP_rcc00920 hypothetical protein
?NC_014034 3061501 = 223 (0.940)coding (1455/2268 nt) pflB formate C‑acetyltransferase
Rejected: Position hash score below cutoff.

CCCGGGCGATTGAAATGCTGCTGGCCCCACCAGTTGCGCAGGTCCTTGGGGCGGAAGACCCAAGGCTTTCCGGCCCCATCGGTGATCGGGGTGCGGATTTGCGCCAG....................................................................................................  >  NC_014034/1016226‑1016332
....................................................................................................GCGCCAGCCAGTCCATCGCCAGATCGAATTTGGCCCGCACCTCGTCATAGTCGAGCACATCCGCGGTGATCGGGCTCAGCCCCCTGGCCACCAGCGCCCCCGACTTT  >  NC_014034/3061501‑3061600
                                                                                                                                                                                                               
                                 TTGCGCAGGTCCTTGGGGCGGAAGACCCAAGGCTTTCCGGCCCCATCGGTGATCGGGGTGCGGATTTGCGCCAGCCAGTCCATCGCCAGATCGAATTTGGC                                                                           >  2:3683556/1‑101 (MQ=255)
                                                                     CCGGCCCCATCGGTGATCGGGGTGCGGATTTGCGCCAGCCAGTCCATCGCCAGATCGAATTTGGCCCGCACCTCGTCATAGTCGAGCACATCCGCGGTGAT                                       <  1:3683831/101‑1 (MQ=255)
                                                                                                                                                                                                               
CCCGGGCGATTGAAATGCTGCTGGCCCCACCAGTTGCGCAGGTCCTTGGGGCGGAAGACCCAAGGCTTTCCGGCCCCATCGGTGATCGGGGTGCGGATTTGCGCCAG....................................................................................................  >  NC_014034/1016226‑1016332
....................................................................................................GCGCCAGCCAGTCCATCGCCAGATCGAATTTGGCCCGCACCTCGTCATAGTCGAGCACATCCGCGGTGATCGGGCTCAGCCCCCTGGCCACCAGCGCCCCCGACTTT  >  NC_014034/3061501‑3061600

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG