New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1085149208 (0.960)2 (0.010) 2/182 36.9 0.01 coding (37/588 nt) RCAP_rcc01000 hypothetical protein
?NC_014034 = 2859600 267 (1.120)coding (94/1869 nt) RCAP_rcc02665 hemolysin‑type calcium‑binding repeat family protein
Rejected: Position hash score below cutoff.

GATCGACCAGCGACGCCGCCGCTTTCGACACCCGCTTCGGGGACACCTCCAGCGCAAGGGCGATCTGGATCGTCGGTGCCGTCAGCGGAAGCGCAAGGTGCTGCAGCAC....................................................................................................  >  NC_014034/1085041‑1085149
....................................................................................................CTGCAGCACACCAACGTCACCCTGCGGGTGCCCGACGGGCAGAACACCTTCGTTCTGTCCGACAATGGCATGACCGATCCGACGCAGTTCGAGGATTCCAGCATGTCCT  <  NC_014034/2859600‑2859501
                                                                                                                                                                                                                 
                                     CGGGGACACCTCCAGCGCAAGGGCGATCTGGATCGTCGGTGCCGTCAGCGGAAGCGCAAGGTGCTGCAGCACACCAACGTCACCCTGCGGGTGCCCGACGG                                                                         >  1:4212855/1‑101 (MQ=255)
                                                                    ATCGTCGGTGCCGTCAGCGGAAGCGCAAGGTGCTGCAGCACACCAACGTCACCCTGCGGGTGCCCGACGGGCAGAACACCTTCGTTCTGTCCGACAATGGC                                          <  2:4212567/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GATCGACCAGCGACGCCGCCGCTTTCGACACCCGCTTCGGGGACACCTCCAGCGCAAGGGCGATCTGGATCGTCGGTGCCGTCAGCGGAAGCGCAAGGTGCTGCAGCAC....................................................................................................  >  NC_014034/1085041‑1085149
....................................................................................................CTGCAGCACACCAACGTCACCCTGCGGGTGCCCGACGGGCAGAACACCTTCGTTCTGTCCGACAATGGCATGACCGATCCGACGCAGTTCGAGGATTCCAGCATGTCCT  <  NC_014034/2859600‑2859501

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG