New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 108627231 (1.060)2 (0.010) 2/184 37.1 0.01 coding (236/855 nt) RCAP_rcc00101 ABC transporter permease
?NC_014034 1787282 = 162 (0.680)intergenic (+7/+220) RCAP_rcc01649/RCAP_rcc01650 ABC transporter ATP‑binding protein/ABC transporter permease
Rejected: Position hash score below cutoff.

TCCGGTCCAGGCGACGGTCCAGCGCCGCGGCAAGGCCAAGCCCCACCGCCAGCGCCGTCGACAGGATCGCGGCGAAAAGCCCGACCTTCACCGAAACGGCGAGCGCGG....................................................................................................  >  NC_014034/108520‑108627
....................................................................................................GAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCCTGCGCTCCGCCC  >  NC_014034/1787282‑1787381
                                                                                                                                                                                                                
                                      AGCCCCACCGCCAGCGCCGTCGACAGGATCGCGGCGAAAAGCCCGACCTTCACCGAAACGGCGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTT                                                                       >  2:704465/1‑101 (MQ=1)
                                                CCAGCGCCGTCGACAGGATCGCGGCGAAAAGCCCGACCTTCACCGAAACGGCGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGT                                                             <  1:704540/101‑1 (MQ=1)
                                                                                                                                                                                                                
TCCGGTCCAGGCGACGGTCCAGCGCCGCGGCAAGGCCAAGCCCCACCGCCAGCGCCGTCGACAGGATCGCGGCGAAAAGCCCGACCTTCACCGAAACGGCGAGCGCGG....................................................................................................  >  NC_014034/108520‑108627
....................................................................................................GAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGCATGACCGTTTCCGCAAGCGGGACAGAGGCCTGCGCTCCGCCC  >  NC_014034/1787282‑1787381

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 38 ≤  ATCG