New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 109825228 (1.040)2 (0.010) 2/184 37.1 0.01 coding (36/1002 nt) RCAP_rcc00102 ABC transporter permease
?NC_014034 3470706 = 165 (0.690)coding (295/321 nt) RCAP_rcc03272 HesB/YadR/YfhF family protein
Rejected: Position hash score below cutoff.

TAGGCCTGCACCGGATCGACCGGGGCCAGCGAGACCAGCGTGAAGAGCCCCGCCATCGCCAGCGGCAGCAGCCAGATCAGCCGGATCAGCCGGTCCAGAAGCAGCCGC....................................................................................................  >  NC_014034/109718‑109825
....................................................................................................GCAGCCGCAGGCGCTTTTGGCGTTGGGGTTGTCAAAGGTGAACCCGGCGCCTTCCAGGTTGCTGACGAAGTCGATCTTCGTGCCCTCGATATGTTCGCGGGTCAGCGG  >  NC_014034/3470706‑3470805
                                                                                                                                                                                                                
                                                       TCGCCAGCGGCAGCAGCCAGATCAGCCGGATCAGCCGGTCCAGAAGCAGCCGCAGGCGCTTTTGGCGTTGGGGTTGTCAAAGGTGAACCCGGCGCCTTCCA                                                      >  2:3452506/1‑101 (MQ=255)
                                                                   GCAGCCAGATCAGCCGGATCAGCCGGTCCAGAAGCAGCCGCAGGCGCTTTTGGCGTTGGGGTTGTCAAAGGTGAACCCGGCGCCTTCCAGGTTGCTGACGA                                          <  1:3452760/101‑1 (MQ=255)
                                                                                                                                                                                                                
TAGGCCTGCACCGGATCGACCGGGGCCAGCGAGACCAGCGTGAAGAGCCCCGCCATCGCCAGCGGCAGCAGCCAGATCAGCCGGATCAGCCGGTCCAGAAGCAGCCGC....................................................................................................  >  NC_014034/109718‑109825
....................................................................................................GCAGCCGCAGGCGCTTTTGGCGTTGGGGTTGTCAAAGGTGAACCCGGCGCCTTCCAGGTTGCTGACGAAGTCGATCTTCGTGCCCTCGATATGTTCGCGGGTCAGCGG  >  NC_014034/3470706‑3470805

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG