New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1115033211 (0.970)2 (0.010) 2/184 37.1 0.01 coding (181/3525 nt) RCAP_rcc01035 hypothetical protein
?NC_014034 2169851 = 197 (0.830)coding (633/891 nt) RCAP_rcc02013 hypothetical protein
Rejected: Position hash score below cutoff.

CCGCCCGCGGCGTCGAAGAAGTAAAGCTGGCTGGCGCGGATCCCCAGATCGGCTTCCTCATAGGGGGCGAGCGTCGCATCGGTGCGCCGATAGCGATAGACCCGGCC....................................................................................................  >  NC_014034/1114927‑1115033
...................................................................................................ACCCGGCCCGAGCTGATTTCCCAGACCAGAAACGGCGCCAGGATCGGCAGCGCCAGCGCGATCTGCACCGCCAGAAGGCCGATCCGGTTCACCTCGGCCGGGAAGGTC  >  NC_014034/2169851‑2169950
                                                                                                                                                                                                               
                                                                            tATCGGTGCGCCGATAGCGATAGACCCGGCCCGAGCTGATTTCCCAGACCAGAAACGGCGCCAGGATCGGCAGCGCCAGCGCGATCTGCACCGCCAGAAGG                                <  1:1040274/100‑1 (MQ=255)
                                                                             ATCGGTGCGCCGATAGCGATAGACCCGGCCCGAGCTGATTTCCCAGACCAGAAACGGCGCCAGGATCGGCAGCGCCAGCGCGATCTGCACCGCCAGAAGGa                               >  2:1040191/1‑100 (MQ=255)
                                                                                                                                                                                                               
CCGCCCGCGGCGTCGAAGAAGTAAAGCTGGCTGGCGCGGATCCCCAGATCGGCTTCCTCATAGGGGGCGAGCGTCGCATCGGTGCGCCGATAGCGATAGACCCGGCC....................................................................................................  >  NC_014034/1114927‑1115033
...................................................................................................ACCCGGCCCGAGCTGATTTCCCAGACCAGAAACGGCGCCAGGATCGGCAGCGCCAGCGCGATCTGCACCGCCAGAAGGCCGATCCGGTTCACCTCGGCCGGGAAGGTC  >  NC_014034/2169851‑2169950

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 25 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG