New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 112459226 (1.030)2 (0.010) 2/184 37.1 0.01 coding (447/765 nt) fhuC1 ferrichrome ABC transporter ATP‑binding protein FhuC
?NC_014034 = 668758 214 (0.900)coding (824/1860 nt) RCAP_rcc00621 signal transduction histidine kinase
Rejected: Position hash score below cutoff.

CCCGCATCGCGCAGCCGCGCCAGATGCGCCATCAGCGCCCGTGCATGCGCCAGATCGAGGTTGTTCAGCGGCTCGTCGAGGATCAGCCAGGGCGTTTCCTGCGCCGCC....................................................................................................  >  NC_014034/112352‑112459
....................................................................................................GCGCCGCCAGCAGGCCCAGCAGCGCAAGGACAGTCAGATCGCGCAGCCGTTCCCCCGCCGCCAGCACAAGCCGCGGCAGCTGAAAGCGCAACATCGCCATCGGCGGGC  <  NC_014034/668758‑668659
                                                                                                                                                                                                                
                                        GTGCATGCGCCAGATCGAGGTTGTTCAGCGGCTCGTCGAGGATCAGCCAGGGCGTTTCCTGCGCCGCCCGCAGGCCCAGCAGCGCAAGGACAGTCAGATCG                                                                     >  1:1377020/1‑101 (MQ=255)
                                                                        cCGTCGAGGATCAGCCAGGGCGTTTCCTGCGCCGCCAGCAGGCCCAGCAGCGCAAGGACAGTCAGATCGCGCAGCCGTTCCCCCGCCGCCAGCACAAGCCG                                     <  2:1376925/100‑1 (MQ=255)
                                                                                                                                                                                                                
CCCGCATCGCGCAGCCGCGCCAGATGCGCCATCAGCGCCCGTGCATGCGCCAGATCGAGGTTGTTCAGCGGCTCGTCGAGGATCAGCCAGGGCGTTTCCTGCGCCGCC....................................................................................................  >  NC_014034/112352‑112459
....................................................................................................GCGCCGCCAGCAGGCCCAGCAGCGCAAGGACAGTCAGATCGCGCAGCCGTTCCCCCGCCGCCAGCACAAGCCGCGGCAGCTGAAAGCGCAACATCGCCATCGGCGGGC  <  NC_014034/668758‑668659

Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 40 ≤  ATCG