New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1178817 =215 (0.980)2 (0.010) 2/184 37.1 0.01 coding (150/216 nt) RCAP_rcc01105 hypothetical protein
?NC_014034 = 3156928 235 (0.990)coding (22/792 nt) RCAP_rcc02966 short‑chain dehydrogenase/reductase family oxidoreductase
Rejected: Position hash score below cutoff.

TCCGTCTCCACCGGCCACACCGGGCTGCGCCTGCCCCCGATCCTCTTGGTCGGCAACCCGGGTTGCGGCAAGAGTCATTATGCGCGCCAGCTCGCGGCAGTTGCGGGC....................................................................................................  <  NC_014034/1178924‑1178817
....................................................................................................TTGCGGGCCGCACCATCTTCATCACCGGCTCGGGCGGCGTGCTGGGATCAACCTATGTGCGCCGGATGCTGGACCAAGGCGCCCGGGTCGTCGCGACCGATCTGCCGG  <  NC_014034/3156928‑3156829
                                                                                                                                                                                                                
                                GCCCCCGATCCTCTTGGTCGGCAACCCGGGTTGCGGCAAGAGTCATTATGCGCGCCAGCTCGCGGCAGTTGCGGGCCGCACCATCTTCATCACCNGCTCGG                                                                             >  1:746256/1‑101 (MQ=255)
                                         CCTCTTGGTCGGCAACCNGGGTCGCGGCAAGAGTCATTATGCGCGCCAGCTCGCGGCAGTTGCGGGCCGCACCATCTTCATCACCGGCTCGGGCGGCGTGC                                                                    <  2:746181/101‑1 (MQ=255)
                                                                                                                                                                                                                
TCCGTCTCCACCGGCCACACCGGGCTGCGCCTGCCCCCGATCCTCTTGGTCGGCAACCCGGGTTGCGGCAAGAGTCATTATGCGCGCCAGCTCGCGGCAGTTGCGGGC....................................................................................................  <  NC_014034/1178924‑1178817
....................................................................................................TTGCGGGCCGCACCATCTTCATCACCGGCTCGGGCGGCGTGCTGGGATCAACCTATGTGCGCCGGATGCTGGACCAAGGCGCCCGGGTCGTCGCGACCGATCTGCCGG  <  NC_014034/3156928‑3156829

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG