New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1191016221 (1.010)2 (0.010) 2/184 37.1 0.01 coding (247/1536 nt) lnt apolipoprotein N‑acyltransferase
?NC_014034 = 1721280 177 (0.750)intergenic (‑175/+271) RCAP_rcc01588/RCAP_rcc01589 GSCFA family protein/ErfK/YbiS/YcfS/YnhG family protein
Rejected: Position hash score below cutoff.

TCGCGATGGGGCAGGCGACCTCTCCCTTTCGGGTCGGGCTGGCGGCGGGCACCGGCTATGCGGCGCTGGCGATGTTCTGGATCGTCGAGCCCTTCTTCGTCGAGCCCG....................................................................................................  >  NC_014034/1190909‑1191016
....................................................................................................CGAGCCCGGTGCGACATTTTGGCGGCAGCCCCGGCAGCCCCCGTCCCCGCACGCCGTCCCCGCACGCCGCGCCCGCAGGCAAAACCCCGCAGGCAAACCTCCGGACTG  <  NC_014034/1721280‑1721181
                                                                                                                                                                                                                
                                                             ctCGCTGGCGATGTTCTGGATCGTCGAGCCCTTCTTCGTCGAGCCCGGTGCGACATTTTGGCGGCAGCCCCGGCAGCCCCCGTCCCCGCACGCCGTCCCCG                                                <  1:4530621/99‑1 (MQ=255)
                                                               CGCTGGCGATGTTCTGGATCGTCGAGCCCTTCTTCGTCGAGCCCGGTGCGACATTTTGGCGGCAGCCCCGGCAGCCCCCGTCCCCGCACGCCGTCCCCGag                                              >  2:4530326/1‑99 (MQ=255)
                                                                                                                                                                                                                
TCGCGATGGGGCAGGCGACCTCTCCCTTTCGGGTCGGGCTGGCGGCGGGCACCGGCTATGCGGCGCTGGCGATGTTCTGGATCGTCGAGCCCTTCTTCGTCGAGCCCG....................................................................................................  >  NC_014034/1190909‑1191016
....................................................................................................CGAGCCCGGTGCGACATTTTGGCGGCAGCCCCGGCAGCCCCCGTCCCCGCACGCCGTCCCCGCACGCCGCGCCCGCAGGCAAAACCCCGCAGGCAAACCTCCGGACTG  <  NC_014034/1721280‑1721181

Base quality scores:  ATCG  < 3 ≤  ATCG  < 28 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG