New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1200656214 (0.960)3 (0.010) 2/188 37.5 0.01 coding (537/672 nt) trpF phosphoribosylanthranilate isomerase
?NC_014034 2178387 = 210 (0.880)coding (157/945 nt) RCAP_rcc02021 DeoR family transcriptional regulator
Rejected: Position hash score below cutoff.

GCGCCGAAGGGCGCGGCGCTGCCGGGCGGCAATGGCCTGTCTTTCGACTGGCGGCTGATTGCGGGCCGGGTCTGGCAACGTCCGTGGATGCTGGCCGGGGGGCTG....................................................................................................  >  NC_014034/1200552‑1200656
...................................................................................................GGGCTGGTGCATGTGCGGCTGGAACACAAGATTTCCGCCTGTCTCGATCTGGAAGTCGCGCTGAGCCGCCGCTTTGCGCTCAAGCTCGCCCGGGTCGTACCCGCCC  >  NC_014034/2178387‑2178486
                                                                                                                                                                                                             
     GAAGGGCGCGGCGCTGCCGGGCGGCAATGGCCTGTCTTTCGACTGGCGGCTGATTGCGGGCCGGGTCTGGCAACGTCCGTGGAGGCTGGCCGGGGGGCCGG                                                                                                     >  2:4134479/1‑101 (MQ=255)
                                                                  CGGGTCTGGCAACGTCCGTGGATGCTGGCCGGGGGGCTGGTGCATGTGCGGCTGGAACACAAGATTTCCGCCTGTCTCGATCTGGAAGTCGCGCTGAGCCG                                        >  2:4369774/1‑101 (MQ=255)
                                                                    GGTCTGGCAACGTCCGTGGATGCTGGCCGGGGGGCTGGTGCATGTGCGGCTGGAACACAAGATTTCCGCCTGTCTCGATCTGGAAGTCGCGCTGAGCCGCC                                      <  1:4370066/101‑1 (MQ=255)
                                                                                                                                                                                                             
GCGCCGAAGGGCGCGGCGCTGCCGGGCGGCAATGGCCTGTCTTTCGACTGGCGGCTGATTGCGGGCCGGGTCTGGCAACGTCCGTGGATGCTGGCCGGGGGGCTG....................................................................................................  >  NC_014034/1200552‑1200656
...................................................................................................GGGCTGGTGCATGTGCGGCTGGAACACAAGATTTCCGCCTGTCTCGATCTGGAAGTCGCGCTGAGCCGCCGCTTTGCGCTCAAGCTCGCCCGGGTCGTACCCGCCC  >  NC_014034/2178387‑2178486

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG