New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1239744163 (0.760)2 (0.010) 2/180 36.7 0.01 coding (107/2013 nt) RCAP_rcc01171 ATP‑dependent RNA helicase DbpA
?NC_014034 = 3644399 264 (1.110)coding (111/771 nt) RCAP_rcc03441 hypothetical protein
Rejected: Position hash score below cutoff.

CATATGACCGACTTCCCCCATCTTCCCGCGGCGCTTGCCGAGGCTCTGTCCGCGCGGGGCTATGATGCCCTGACGCCCGTTCAGGACGCGGTGACGCGCCCCGAGCTGGC....................................................................................................  >  NC_014034/1239635‑1239744
....................................................................................................CCGAGCTGGCGCAGCTGCGCGACGATGCGCAGACCCTGCGGCGCAGGCTGGATCAGGTGCTGTTTCAGGCGGAAGAACGTCTGGCCCTGCCGCCCGGCGGCGACGGGATC  <  NC_014034/3644399‑3644300
                                                                                                                                                                                                                  
                                            TCTGTCCGCGCGGGGCTATGATGCCCTGACGCCCGTTCAGGACGCGGTGACGCGCCCCGAGCTGGCGCAGCTGCGCGACGATGCGCAGACCCTGCGGCGCA                                                                   >  1:1159502/1‑101 (MQ=255)
                                                                       GACGCCCGTTCAGGACGCGGTGACGCGCCCCGAGCTGGCGCAGCTGCGCGACGATGCGCAGACCCTGCGGCGCAGGCTGGATCAGGTGCTGTTTCAGGCGG                                        <  2:1159410/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CATATGACCGACTTCCCCCATCTTCCCGCGGCGCTTGCCGAGGCTCTGTCCGCGCGGGGCTATGATGCCCTGACGCCCGTTCAGGACGCGGTGACGCGCCCCGAGCTGGC....................................................................................................  >  NC_014034/1239635‑1239744
....................................................................................................CCGAGCTGGCGCAGCTGCGCGACGATGCGCAGACCCTGCGGCGCAGGCTGGATCAGGTGCTGTTTCAGGCGGAAGAACGTCTGGCCCTGCCGCCCGGCGGCGACGGGATC  <  NC_014034/3644399‑3644300

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG