New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 12558655 (0.030)82 (0.480) 44/144 8.1 0.50 intergenic (+35/+207) RCAP_rcc01184/RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer
?NC_014034 = 1740898 158 (0.670)coding (1215/1215 nt) RCAP_rcc01610 hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 161 total aligned reads displayed.

GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG................................................................................................................................  >  NC_014034/1255767‑1255865
...............................................................................................................................GGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGCCG  <  NC_014034/1740898‑1740799
                                                                                                   ||||||||||||||||||||||||||||                                                                                                    
 AAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCC                                                                                                                               <  1:516183/101‑1 (MQ=1)
 AAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCC                                                                                                                               <  2:353745/101‑1 (MQ=1)
 AAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCC                                                                                                                               >  1:2111390/1‑101 (MQ=1)
  AATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCC                                                                                                                              <  2:4664679/101‑1 (MQ=1)
  AATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCC                                                                                                                              <  1:1456305/101‑1 (MQ=1)
   ATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCC                                                                                                                             <  2:252505/101‑1 (MQ=1)
   ATACGGCCGCACAAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCC                                                                                                                             >  1:2529940/1‑101 (MQ=1)
    aACGGCCGCACCAAAGAGGCCGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCC                                                                                                                            <  2:1012307/100‑1 (MQ=0)
     ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                                                                                           <  2:2622116/101‑1 (MQ=1)
     ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                                                                                           <  2:2846657/101‑1 (MQ=1)
     ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                                                                                           >  1:2410258/1‑101 (MQ=1)
     ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                                                                                           <  1:2210507/101‑1 (MQ=1)
     ACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCG                                                                                                                           <  2:532773/101‑1 (MQ=1)
       GGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCT                                                                                                                         >  1:4605002/1‑101 (MQ=1)
       GGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCT                                                                                                                         <  1:3736971/101‑1 (MQ=1)
       GGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCT                                                                                                                         <  2:3132219/101‑1 (MQ=1)
        GCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTT                                                                                                                        <  2:470742/101‑1 (MQ=1)
        GCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTT                                                                                                                        <  1:1651661/101‑1 (MQ=1)
         CCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTT                                                                                                                       <  2:434255/101‑1 (MQ=1)
          CGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTC                                                                                                                      <  2:4448766/101‑1 (MQ=1)
            CACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGG                                                                                                                    >  2:3778869/1‑101 (MQ=1)
             ACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGc                                                                                                                   >  1:4603664/1‑100 (MQ=1)
              CCAAGGAGGCGGCGAAGAAGGAAGTCGACGATTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTC                                                                                                                  <  2:2674433/101‑1 (MQ=1)
               CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                                                                                                 >  2:12617/1‑101 (MQ=1)
               CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                                                                                                 <  1:4347499/101‑1 (MQ=1)
               CAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCC                                                                                                                 <  1:182207/101‑1 (MQ=1)
                AAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCG                                                                                                                <  1:772445/101‑1 (MQ=1)
                  GGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCC                                                                                                              <  1:2938527/101‑1 (MQ=1)
                  GGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCC                                                                                                              >  1:1818319/1‑101 (MQ=1)
                   GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                                                                                             <  2:1199159/101‑1 (MQ=1)
                   GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                                                                                             <  2:2319833/101‑1 (MQ=1)
                   GAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCC                                                                                                             <  2:1869586/101‑1 (MQ=1)
                    gGGCGGCGAAGAAGCAAGTCGCCGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCTGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                                                                                            <  2:4563750/100‑1 (MQ=0)
                    AGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCG                                                                                                            >  2:1518082/1‑101 (MQ=1)
                       gGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAG                                                                                                         <  1:2696914/100‑1 (MQ=1)
                        GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCTGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGA                                                                                                        <  2:4022302/101‑1 (MQ=1)
                        GGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGA                                                                                                        <  2:4295398/101‑1 (MQ=1)
                         GCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAG                                                                                                       <  2:3909253/101‑1 (MQ=1)
                           GAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGG                                                                                                     >  2:3481757/1‑101 (MQ=1)
                            AAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGG                                                                                                    >  1:3086497/1‑101 (MQ=1)
                             AGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGG                                                                                                   <  2:1780443/101‑1 (MQ=1)
                             AGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGG                                                                                                   >  1:2999180/1‑101 (MQ=1)
                              GAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGG                                                                                                  <  1:662126/101‑1 (MQ=1)
                               AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                                                                                                 <  2:2126450/101‑1 (MQ=1)
                               AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                                                                                                 >  2:1777990/1‑101 (MQ=1)
                               AAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGG                                                                                                 >  1:2622892/1‑101 (MQ=1)
                                AGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGC                                                                                                <  2:4528672/101‑1 (MQ=1)
                                 GGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCG                                                                                               <  2:4015066/101‑1 (MQ=1)
                                 GGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCG                                                                                               <  2:3371638/101‑1 (MQ=1)
                                 GGAAGTAGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCG                                                                                               <  1:1108747/101‑1 (MQ=1)
                                   AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCc                                                                                             >  1:1630644/1‑100 (MQ=1)
                                   AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                                                                                             <  1:2741890/101‑1 (MQ=1)
                                   AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                                                                                             <  1:889204/101‑1 (MQ=1)
                                   AAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCT                                                                                             <  2:4235542/101‑1 (MQ=1)
                                    AGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTG                                                                                            >  2:1633078/1‑101 (MQ=1)
                                       CGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCC                                                                                         <  2:410178/101‑1 (MQ=1)
                                        GACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCC                                                                                        >  1:2461293/1‑101 (MQ=1)
                                           gcCTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGGGCCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCG                                                                                     <  1:2188219/99‑1 (MQ=0)
                                           GACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCG                                                                                     >  1:660020/1‑101 (MQ=1)
                                            ACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT                                                                                    <  1:1149137/101‑1 (MQ=1)
                                            ACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGT                                                                                    >  1:914153/1‑101 (MQ=1)
                                            ACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCAGGTCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCac                                                                                    >  1:3766505/1‑99 (MQ=0)
                                             CTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTC                                                                                   <  2:3154124/101‑1 (MQ=1)
                                              TTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCC                                                                                  >  1:1421850/1‑101 (MQ=1)
                                              TTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCC                                                                                  <  1:3167746/101‑1 (MQ=1)
                                                CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTTGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCT                                                                                <  2:7696/101‑1 (MQ=1)
                                                CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCT                                                                                <  1:2199353/101‑1 (MQ=1)
                                                CCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCT                                                                                >  1:2736927/1‑101 (MQ=1)
                                                 CTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTG                                                                               <  2:2449443/101‑1 (MQ=1)
                                                  TGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGC                                                                              >  1:2077180/1‑101 (MQ=1)
                                                    TCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGG                                                                            >  2:3627084/1‑101 (MQ=1)
                                                      GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGA                                                                          >  2:2526854/1‑101 (MQ=1)
                                                      GAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGA                                                                          >  1:3456204/1‑101 (MQ=1)
                                                          CTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGACCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGGCTCC                                                                      >  1:622360/1‑101 (MQ=0)
                                                           TCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCC                                                                     <  2:4604701/101‑1 (MQ=1)
                                                             TGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCC                                                                   <  2:4432780/101‑1 (MQ=1)
                                                              ggCCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCCTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCC                                                                  <  1:2810349/99‑1 (MQ=1)
                                                               gCCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCG                                                                 <  2:2998951/100‑1 (MQ=1)
                                                               ACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCG                                                                 <  2:262693/101‑1 (MQ=1)
                                                                 CTAGGGGTGCCGGACCGGAACGGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGCCCCTGCGGGACTCCCCCCGgg                                                               >  2:169957/1‑99 (MQ=0)
                                                                  TAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGgga                                                              >  2:3177762/1‑98 (MQ=1)
                                                                  TAGGGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGgga                                                              >  2:3257410/1‑98 (MQ=1)
                                                                     GGGTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATAT                                                           <  2:2204250/101‑1 (MQ=1)
                                                                       GTGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTT                                                         <  1:2707785/101‑1 (MQ=1)
                                                                        TGCCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTc                                                        >  2:409650/1‑100 (MQ=11)
                                                                          CCGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTccg                                                      <  1:1997034/101‑4 (MQ=11)
                                                                           CGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGCTATTTccgc                                                     >  1:1594806/1‑97 (MQ=2)
                                                                           CGGACCGGAACCGGGGGCCTTCGGGCCCCCGCTTTCGGTCCGCCCGAAGAGGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGGGATATTTccgc                                                     >  1:260502/1‑97 (MQ=11)
                                                                                                                        ggcgtaGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGG        <  1:3656202/95‑1 (MQ=12)
                                                                                                                         gcgtaGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGG       <  1:3657120/96‑1 (MQ=18)
                                                                                                                          cgtaGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGG      >  1:818632/5‑101 (MQ=18)
                                                                                                                          cgtaGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGG      >  1:2482998/5‑101 (MQ=18)
                                                                                                                           gtaGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGG     >  2:4586254/4‑101 (MQ=18)
                                                                                                                           gtaGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGG     <  2:560524/98‑1 (MQ=21)
                                                                                                                            taGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGC    >  1:2447583/3‑101 (MQ=21)
                                                                                                                             aGGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGCC   >  1:3221669/2‑101 (MQ=25)
                                                                                                                              GGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGCCG  >  1:569832/1‑101 (MQ=37)
                                                                                                                              GGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGCCG  <  2:1842837/101‑1 (MQ=37)
                                                                                                                              GGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGCCG  >  2:2819964/1‑101 (MQ=37)
                                                                                                                              GGGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGCCG  >  2:1574597/1‑101 (MQ=37)
                                                                                                   ||||||||||||||||||||||||||||                                                                                                    
GAAATACGGCCGCACCAAGGAGGCGGCGAAGAAGGAAGTCGACGACTTCCTGTCGAAACTCTGACCTAGGGGTGCCGGACCGGAACCGGGGGCCTTCGG................................................................................................................................  >  NC_014034/1255767‑1255865
...............................................................................................................................GGGGGCGCTGCCCCCCGTCCCTGCGGGACTCCCCCCGAGGTATTTGAAGCAAGATGAAACCGGATGCCTTTCATCTTGCTCGAAATATCCCGGGGGGCCG  <  NC_014034/1740898‑1740799

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG