New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 127035 =221 (1.010)2 (0.010) 2/184 37.1 0.01 coding (937/1689 nt) RCAP_rcc00121 family 14 glycosyl transferase
?NC_014034 1141472 = 203 (0.850)coding (145/375 nt) pyp photoactive yellow protein
Rejected: Position hash score below cutoff.

CCACCTTCCTCTCGGACCGGCCCGCCGAAAGCCTGGCCGAGCCGAATCCGTCCAAGATCGACCGGCTGTTTTCCAAGGCGGTCGAACGGCGCACGCGCGGGCGGCCCG...................................................................................................  <  NC_014034/127142‑127035
....................................................................................................GCGGCCCGCGATCAGCCCCTCGGCCTTGTTGTATTTGGCGATCCGCCCCATGCGGTCGAGAAGCACGGCGCCGAACGGCAGGCTTTCCGCACGCGCGGGCTCGCGCG  >  NC_014034/1141472‑1141570
                                                                                                                                                                                                               
                                                               atCTGTTTTCCAAGGCGGTCGAACGGCGCACGCGCGGGCGGCCCGCGATCAGCCCCTCGGCCTTGTTGTATTTGGCGATCCGCCCCATGCGGTCGAGAAGC                                             <  2:2990819/99‑1 (MQ=255)
                                                                   GTTTTCCAAGGCGGTCGAACGGCGCACGCGCGGGCGGCCCGCGATCAGCCCCTCGGCCTTGTTGTATTTGGCGATCCGCCCCATGCGGTCGAGAAGCAgat                                         >  1:2991048/1‑98 (MQ=255)
                                                                                                                                                                                                               
CCACCTTCCTCTCGGACCGGCCCGCCGAAAGCCTGGCCGAGCCGAATCCGTCCAAGATCGACCGGCTGTTTTCCAAGGCGGTCGAACGGCGCACGCGCGGGCGGCCCG...................................................................................................  <  NC_014034/127142‑127035
....................................................................................................GCGGCCCGCGATCAGCCCCTCGGCCTTGTTGTATTTGGCGATCCGCCCCATGCGGTCGAGAAGCACGGCGCCGAACGGCAGGCTTTCCGCACGCGCGGGCTCGCGCG  >  NC_014034/1141472‑1141570

Base quality scores:  ATCG  < 3 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG