New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1289102185 (0.850)2 (0.010) 2/184 37.1 0.01 coding (910/1347 nt) glmM phosphoglucosamine mutase
?NC_014034 = 2478085 182 (0.770)coding (455/645 nt) RCAP_rcc02304 hypothetical protein
Rejected: Position hash score below cutoff.

CGGCGCGTTGGGCCGAGGCGGGGCTTTTGCGCGGCGGCGCGCTGGTGGCCACGGTGATGTCGAACCTGGGGCTGGAGCGCTTCCTGACCGGGCGGGGGCTGGCGCTGG....................................................................................................  >  NC_014034/1288995‑1289102
....................................................................................................GGCGCTGGCCGCACCCGGGGCGCCGTTCCGGCTGATGGCGATGGAGCAGCAGGCGCTGGCGGCGCTGGACGCGGGCGACAAGGATGGCGCCATCGCGAAGGCGCGCGA  <  NC_014034/2478085‑2477986
                                                                                                                                                                                                                
                                                              AACCTGGGGCTGGAGCGCTTCCTGACCGGGCGGGGGCTGGCGCTGGCCGCACCCGGGGCGCCGTTCCGGCTGATGGCGATGGAGCAGCAGGCGCTGGCGGC                                               >  1:3727584/1‑101 (MQ=255)
                                                                           AGCGCTTCCTGACCGGGCGGGGGCTGGCGCTGGCCGCACCCGGGGCGCCGTTCCGGCTGATGGCGATGGAGCAGCAGGCGCTGGCGGCGCTGGACGCGGGC                                  <  2:3727309/101‑1 (MQ=255)
                                                                                                                                                                                                                
CGGCGCGTTGGGCCGAGGCGGGGCTTTTGCGCGGCGGCGCGCTGGTGGCCACGGTGATGTCGAACCTGGGGCTGGAGCGCTTCCTGACCGGGCGGGGGCTGGCGCTGG....................................................................................................  >  NC_014034/1288995‑1289102
....................................................................................................GGCGCTGGCCGCACCCGGGGCGCCGTTCCGGCTGATGGCGATGGAGCAGCAGGCGCTGGCGGCGCTGGACGCGGGCGACAAGGATGGCGCCATCGCGAAGGCGCGCGA  <  NC_014034/2478085‑2477986

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG