New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1316534245 (1.150)2 (0.010) 2/180 36.7 0.01 coding (615/1104 nt) potA1 polyamine ABC transporter ATP binding protein PotA
?NC_014034 3080334 = 197 (0.830)coding (391/957 nt) RCAP_rcc02883 DeoR family transcriptional regulator
Rejected: Position hash score below cutoff.

TCGGCGCGCTCGACAAGCAGCTGCGCGAGCACATGCAGTTCGAAATCAAGCACCTGCATGACAGCCTGGGCCTGACCGTCGTTTATGTGACGCATGATCAGGGCGAGGCG....................................................................................................  >  NC_014034/1316425‑1316534
....................................................................................................GGGCGAGGCGGTCTCGACCACGCTGCGCTACATGGCGCCGGTGTTTCCGCAATCGAATGTCTCGCTGGTCAGCCTGACCGGCGGGGTTTCGGCCTATATCGGCAATACCG  >  NC_014034/3080334‑3080433
                                                                                                                                                                                                                  
                                                      TGCATGACAGCCTGGGCCTGACCGTCGTTTATGTGACGCATGATCAGGGCGAGGCGGTCTCGACCACGCTGCGCTACATGGCGCCGGTGTTTCCGCAATCG                                                         >  2:3035350/1‑101 (MQ=255)
                                                                       CTGACCGTCGTTTATGTGACGCATGATCAGGGCGAGGCGGTCTCGACCACGCTGCGCTACATGGCGCCGGTGTTTCCGCAATCGAATGTCTCGCTGGTCAG                                        <  1:3035594/101‑1 (MQ=255)
                                                                                                                                                                                                                  
TCGGCGCGCTCGACAAGCAGCTGCGCGAGCACATGCAGTTCGAAATCAAGCACCTGCATGACAGCCTGGGCCTGACCGTCGTTTATGTGACGCATGATCAGGGCGAGGCG....................................................................................................  >  NC_014034/1316425‑1316534
....................................................................................................GGGCGAGGCGGTCTCGACCACGCTGCGCTACATGGCGCCGGTGTTTCCGCAATCGAATGTCTCGCTGGTCAGCCTGACCGGCGGGGTTTCGGCCTATATCGGCAATACCG  >  NC_014034/3080334‑3080433

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG