New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1319923211 (0.980)2 (0.010) 2/182 36.9 0.01 coding (335/954 nt) potI1 polyamine ABC transporter permease PotI
?NC_014034 = 3372656 249 (1.050)coding (1029/1398 nt) argH1 argininosuccinate lyase
Rejected: Position hash score below cutoff.

ACCCCGAGGCGCCGCGCGACATGGCCTTCTGGTGGGATTTCTGGCAGAATGCGACCTGGGTGCAGGTGACGAAACATTCGGTGATCATCGGGGTTTTCGCCACGCTGAT...................................................................................................  >  NC_014034/1319815‑1319923
....................................................................................................CACGCTGATGCTGGCCTTGGCGGCGATGACCGGGATGATGTCGGATCTGACGGTGAACACCGCGAAACTGGAAGCCGCGGCCTCGTCGGGCTTTTCCACCGCGACGGA  <  NC_014034/3372656‑3372558
                                                                                                                                                                                                                
                                     TTTCTGGCAGAATGCGACCTGGGTGCAGGTGACGAAACATTCGGTGATCATCGGGGTTTTCGCCACGCTGATGCTGGCCTTGGCGGCGATGACCGGGATGA                                                                        >  1:4180336/1‑101 (MQ=255)
                                      TTCTGGCAGAATGCGACCTGGGTGCAGGTGACGAAACATTCGGTGATCATCGGGGTTTTCGCCACGCTGATGCTGGCCTTGGCGGCGATGACCGGGATGAT                                                                       <  2:4180048/101‑1 (MQ=255)
                                                                                                                                                                                                                
ACCCCGAGGCGCCGCGCGACATGGCCTTCTGGTGGGATTTCTGGCAGAATGCGACCTGGGTGCAGGTGACGAAACATTCGGTGATCATCGGGGTTTTCGCCACGCTGAT...................................................................................................  >  NC_014034/1319815‑1319923
....................................................................................................CACGCTGATGCTGGCCTTGGCGGCGATGACCGGGATGATGTCGGATCTGACGGTGAACACCGCGAAACTGGAAGCCGCGGCCTCGTCGGGCTTTTCCACCGCGACGGA  <  NC_014034/3372656‑3372558

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG