New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1342832	260 (1.140)	2 (0.010)	2/192	38.0	0.01	coding (1168/1344 nt)	RCAP_rcc01264	reverse transcriptase
	?	NC_014034	= 1342845	245 (1.030)					coding (1181/1344 nt)	RCAP_rcc01264	reverse transcriptase
Rejected: Position hash score below cutoff.

TGCTGGTTTGGTTTCGGGTCAAGCGGAGGCTTCTAGGGTCAAAAGACTTGTTCGAGCTTATCATGAAATTAAATACAATCTGCACGGGACTAAATACATCCCCA....................................................................................................  >  NC_014034/1342729‑1342832 ....................................................................................................CCCATATTTGTCAAAATTGGGGATGTATTTAGTCCCGTGCAGATTGTATTTAATTTCATGATAAGCTCGAACAAGTCTTTTGACCCTAGAAGCCTCCGCTTGAC  <  NC_014034/1342845‑1342746                                                                                                                                                                                                                                                                                    gatctCAATCTGCACGGGACTAAATACATCCCCATATTTGTCAAAATTGGGGATGTATTTAGTCCCGTGCAGATTGTATTTAATTTCATGATAAGCTCGAA                                   <  1:1610244/96‑1 (MQ=255)                                                                            CAATCTGCACGGGACTAAATACATCCCCATATTTGTCAAAATTGGGGATGTATTTAGTCCCGTGCAGATTGTATTTAATTTCATGATAAGCTCGAAagatc                              >  2:1610139/1‑96 (MQ=255)                                                                                                                                                                                                              TGCTGGTTTGGTTTCGGGTCAAGCGGAGGCTTCTAGGGTCAAAAGACTTGTTCGAGCTTATCATGAAATTAAATACAATCTGCACGGGACTAAATACATCCCCA....................................................................................................  >  NC_014034/1342729‑1342832 ....................................................................................................CCCATATTTGTCAAAATTGGGGATGTATTTAGTCCCGTGCAGATTGTATTTAATTTCATGATAAGCTCGAACAAGTCTTTTGACCCTAGAAGCCTCCGCTTGAC  <  NC_014034/1342845‑1342746 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 26 ≤  ATCG  < 31 ≤  ATCG  < 38 ≤  ATCG