New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 135293	223 (1.020)	2 (0.010)	2/184	37.1	0.01	coding (516/1032 nt)	RCAP_rcc00129	LacI family transcriptional regulator
	?	NC_014034	2083879 =	238 (1.000)					intergenic (‑762/+35)	RCAP_rcc01927/hsdR3	hypothetical protein/type I restriction‑modification system RcaSBIV subunit R
Rejected: Position hash score below cutoff.

CCCTCCAGCCGTTTGCGGGCGCGATGATCCTCGGGCATCTTGGTGCCCAGAAAGCCGATCTTGCGATAGCCCGCCGCCGCAATCGCCTGCGCCATCTGCAGCCCGGCG....................................................................................................  >  NC_014034/135186‑135293 ....................................................................................................GCCCGGCGTTCACATACCATGGCAGGAGCGAAAGGGGGCACGATCACTGCCGATAGAGATTGCGCTGCACTTTTATGAAAGCCTCACGAATCGTCAGCACATCACCAA  >  NC_014034/2083879‑2083978                                                                                                                                                                                                                                                 CGGGCATCTTGGTGCCCAGAAAGCCGATCTTGCGATAGCCCGCCGCCGCAATCGCCTGCGCCATCTGCAGCCCGGCGTTCACATACCATGGCAGGAGCGAA                                                                              >  2:1518143/1‑101 (MQ=255)                                                   AAAGCCGATCTTGCGATAGCCCGCCGCCGCAATCGCCTGCGCCATCTGCAGCCCGGCGTTCACATACCATGGCAGGAGCGAAAGGGGGCACGATCACTGCC                                                           <  1:1518252/101‑1 (MQ=255)                                                                                                                                                                                                                  CCCTCCAGCCGTTTGCGGGCGCGATGATCCTCGGGCATCTTGGTGCCCAGAAAGCCGATCTTGCGATAGCCCGCCGCCGCAATCGCCTGCGCCATCTGCAGCCCGGCG....................................................................................................  >  NC_014034/135186‑135293 ....................................................................................................GCCCGGCGTTCACATACCATGGCAGGAGCGAAAGGGGGCACGATCACTGCCGATAGAGATTGCGCTGCACTTTTATGAAAGCCTCACGAATCGTCAGCACATCACCAA  >  NC_014034/2083879‑2083978 Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG