New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1396198125 (0.810)56 (0.360) 10/130 22.4 0.47 coding (80/1578 nt) RCAP_rcc01307 hypothetical protein
?NC_014034 1397766 = 0 (0.000)intergenic (+70/+1828) RCAP_rcc01307/RCAP_rcc01309 hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

CGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.......................................................................................................................................  >  NC_014034/1396151‑1396198
...................................................................................GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  NC_014034/1397766‑1397865
                                                |||||||||||||||||||||||||||||||||||                                                                                                    
cttctggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGG                                                                                    >  1:203179/11‑101 (MQ=0)
cttctggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGG                                                                                    >  2:181612/11‑101 (MQ=0)
 ttctggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGG                                                                                   <  2:3163444/92‑1 (MQ=0)
  tctggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGC                                                                                  <  2:4665273/93‑1 (MQ=0)
  tctggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGC                                                                                  <  1:1185588/93‑1 (MQ=0)
  tctggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGC                                                                                  <  1:1872542/93‑1 (MQ=0)
  tctggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGCATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGC                                                                                  <  1:3937364/93‑1 (MQ=0)
    tggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGg                                                                                >  2:2247085/7‑100 (MQ=0)
    tggtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGT                                                                                <  2:874002/95‑1 (MQ=0)
      gtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGG                                                                              <  2:370638/97‑1 (MQ=1)
      gtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGGGG                                                                              >  2:1878486/5‑101 (MQ=0)
      gtgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCCTGG                                                                              <  2:3952715/97‑1 (MQ=0)
       tgcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGA                                                                             >  1:901269/4‑101 (MQ=1)
        gcCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGgagcgac                                                                            <  2:958090/99‑8 (MQ=0)
         cCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATC                                                                           <  1:2866016/100‑1 (MQ=1)
         cCGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATC                                                                           <  1:362189/100‑1 (MQ=1)
          cgtTGCGTCGCTCCCCCCGCGGGGGCCTGGATCGAAACACCCCGAACCTGTCGACGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCG                                                                          <  2:774801/98‑1 (MQ=0)
          CGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGGGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGCCGTGGATCG                                                                          >  2:4619420/1‑101 (MQ=0)
          CGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCG                                                                          <  1:1588754/101‑1 (MQ=1)
          CGCTGCGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTCCCCGAACCTGTCGGCGGCGAACACCGATGCCGCGTCGCTCCCCCCGCGGGGGCGTGGATCG                                                                          <  2:3799314/101‑1 (MQ=0)
           GCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGA                                                                         >  2:573027/1‑101 (MQ=1)
            CTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                                                                        <  2:1510206/101‑1 (MQ=1)
            CTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                                                                        <  1:4626361/101‑1 (MQ=1)
            CTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                                                                        <  1:4388192/101‑1 (MQ=1)
            CTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA                                                                        >  1:4180787/1‑101 (MQ=1)
             TGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA                                                                       >  2:3025890/1‑101 (MQ=1)
             TGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA                                                                       <  2:2065067/101‑1 (MQ=1)
             TGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA                                                                       >  2:2043302/1‑101 (MQ=1)
              GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAGACCTCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC                                                                      <  1:3991238/101‑1 (MQ=0)
              GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC                                                                      <  2:1202685/101‑1 (MQ=1)
               CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                                     <  2:2771772/101‑2 (MQ=1)
                GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACat                                                                    <  1:3312653/101‑3 (MQ=1)
                GTCGCGCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACat                                                                    <  1:4581766/101‑3 (MQ=1)
                 TCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatc                                                                   <  1:3926598/101‑4 (MQ=1)
                  CGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcg                                                                  <  1:2927772/101‑5 (MQ=1)
                  CGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcg                                                                  <  1:1673210/101‑5 (MQ=1)
                  CGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcg                                                                  <  2:4330274/101‑5 (MQ=1)
                  CGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcg                                                                  <  2:1231429/101‑5 (MQ=1)
                  CGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGGGGATCGACACatcg                                                                  >  2:2297310/1‑97 (MQ=0)
                   GCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcga                                                                 >  2:2015063/1‑96 (MQ=1)
                    CTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgat                                                                >  1:202806/1‑95 (MQ=1)
                    CTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgat                                                                >  2:279151/1‑95 (MQ=1)
                     cCCCCCCGCGGGGGCGTGGATCGAAACCCCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatg                                                               <  1:2765150/100‑8 (MQ=0)
                     cCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatg                                                               <  2:529006/100‑8 (MQ=1)
                     cCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatg                                                               <  1:1947330/100‑8 (MQ=1)
                     TCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatg                                                               >  2:3078909/1‑94 (MQ=1)
                     TCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatg                                                               >  2:1088950/1‑94 (MQ=1)
                     TCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatg                                                               >  1:410738/1‑94 (MQ=1)
                     TCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatagatg                                                               >  2:1847543/1‑94 (MQ=1)
                      CCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatga                                                              >  1:4088146/1‑93 (MQ=1)
                       CCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatgat                                                             <  1:989310/101‑10 (MQ=1)
                        CCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatgatc                                                            <  1:2553121/101‑11 (MQ=0)
                        CCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatgatc                                                            >  1:2610532/1‑91 (MQ=0)
                        CCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatgatc                                                            >  1:1722554/1‑91 (MQ=0)
                        CCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatgatc                                                            <  2:2188897/101‑11 (MQ=0)
                        CCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGGCGGCGAACACCGATACCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACatcgatgatc                                                            <  1:2628110/101‑11 (MQ=0)
                                                                        cgggctcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGC            <  1:3955445/91‑1 (MQ=2)
                                                                         gggctcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCG           >  2:889682/10‑101 (MQ=2)
                                                                         gggctcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCG           >  1:2955982/10‑101 (MQ=2)
                                                                           gctcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTG         >  2:1966454/8‑101 (MQ=2)
                                                                           gctcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTG         <  2:3662995/94‑1 (MQ=2)
                                                                            ctcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGG        <  2:2185330/95‑1 (MQ=2)
                                                                            ctcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGG        <  2:202782/95‑1 (MQ=2)
                                                                             tcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGA       >  2:3102719/6‑101 (MQ=11)
                                                                             tcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGA       <  1:2247247/96‑1 (MQ=11)
                                                                             tcgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGA       >  2:1407283/6‑101 (MQ=11)
                                                                              cgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGAT      <  2:2867392/97‑1 (MQ=11)
                                                                              cgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGAT      <  2:3222478/97‑1 (MQ=11)
                                                                              cgatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCACTCCCCCCGCGGGGGCGTGGAT      >  1:1527755/5‑101 (MQ=2)
                                                                               gatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCTCCATGTCGCTCCCCCCGCGGGGGCGTGGATC     <  1:4160674/98‑1 (MQ=2)
                                                                               gatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATC     >  1:2982794/4‑101 (MQ=11)
                                                                               gatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATC     <  1:3926797/98‑1 (MQ=11)
                                                                               gatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATC     >  2:4670635/4‑101 (MQ=11)
                                                                               gatCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATC     <  2:2871531/98‑1 (MQ=11)
                                                                               catCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATC     <  2:888722/98‑1 (MQ=11)
                                                                                atCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCG    >  2:3964383/3‑101 (MQ=11)
                                                                                atCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCG    >  1:4015609/3‑101 (MQ=11)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCTCGGGGGCGGGGATCGAA  >  2:4489095/1‑101 (MQ=2)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  <  2:1274448/101‑1 (MQ=11)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  2:1056856/1‑101 (MQ=11)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  1:4572017/1‑101 (MQ=11)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  <  2:3716221/101‑1 (MQ=11)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  1:2677813/1‑101 (MQ=11)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  <  2:2053078/101‑1 (MQ=11)
                                                                                  CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  2:2773969/1‑101 (MQ=11)
                                                |||||||||||||||||||||||||||||||||||                                                                                                    
CGCGCCGCCACGCTGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.......................................................................................................................................  >  NC_014034/1396151‑1396198
...................................................................................GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGTGTCCAGCGTCACATGCAGCGGCGTCGCATCGCCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  NC_014034/1397766‑1397865

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG