New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1396364 =	144 (0.870)	30 (0.180)	11/140	23.1	0.16	coding (246/1578 nt)	RCAP_rcc01307	hypothetical protein
	?	NC_014034	= 1397265	171 (0.720)					coding (1147/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

AGGGCGCGGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGCGTT........................................................................  <  NC_014034/1396409‑1396364 ............................................................................GTTTCGATCCACGCCCCCGCGGGGGGAGCGACGGCGCGGATC  <  NC_014034/1397265‑1397224                                               ||||||||||||||||||||||||||||||                                           gcgccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGG                   <  2:2892078/93‑1 (MQ=255)  cgccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGG                  <  2:4225129/94‑1 (MQ=255)  cgccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGG                  >  2:2590023/8‑101 (MQ=255)  cgccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGG                  >  1:301319/8‑101 (MQ=255)   gccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGA                 <  1:1594822/95‑1 (MQ=255)   gccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGA                 <  2:2224239/95‑1 (MQ=255)   gccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGA                 <  1:3617027/95‑1 (MQ=255)   gccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGA                 <  1:80111/95‑1 (MQ=255)    ccagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAG                <  2:2142452/96‑1 (MQ=255)     cagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGC               >  1:1049661/5‑101 (MQ=255)     cagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGC               <  1:1806071/97‑1 (MQ=255)     cagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGC               >  2:2527058/5‑101 (MQ=255)     cagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGC               >  1:350411/5‑101 (MQ=255)     cagcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGC               >  1:4303982/5‑101 (MQ=255)      agcGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCG              >  1:852934/4‑101 (MQ=255)        cGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGAC            >  1:115299/2‑101 (MQ=255)        cGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGAC            <  2:4392345/100‑1 (MQ=255)        cGTTTCGATCCACGCCCACGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGAC            <  2:4186878/100‑1 (MQ=255)         GTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACG           >  1:2147110/1‑101 (MQ=255)           TTCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGcc         <  1:2800052/101‑3 (MQ=255)            taGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCG        >  1:4335402/3‑101 (MQ=255)            TCGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGccc        >  2:1473821/1‑98 (MQ=255)             CGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGC       >  2:1403129/1‑101 (MQ=255)             CGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGC       <  1:3607925/101‑1 (MQ=255)             CGATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCAAATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGC       >  2:1981517/1‑101 (MQ=255)              GATCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGCa      >  2:1819199/1‑100 (MQ=255)                TCCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGCAGA    <  2:4267776/101‑1 (MQ=255)                 CCACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGCAGAT   >  1:3121809/1‑101 (MQ=255)                  CACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGCAGATC  >  1:809868/1‑101 (MQ=255)                  CACGCCCCCGCGGGGGGAGCGACAGTGTTGACCACATATTTGTTGGCGGTGTCAGCAGCGTTTCGATCCACGCCCCCGCGGGGGGAGCGACGCCGCAGATC  >  2:3326448/1‑101 (MQ=255)                                               ||||||||||||||||||||||||||||||                                           AGGGCGCGGTTTCGATCCACGCCCCCGCGGGGGGAGCGACAGCGTT........................................................................  <  NC_014034/1396409‑1396364 ............................................................................GTTTCGATCCACGCCCCCGCGGGGGGAGCGACGGCGCGGATC  <  NC_014034/1397265‑1397224 Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 34 ≤  ATCG  < 39 ≤  ATCG