New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1413054263 (1.140)3 (0.010) 2/194 38.2 0.01 coding (775/4698 nt) RCAP_rcc01318 outer membrane autotransporter barrel domain‑containing protein
?NC_014034 = 2850713 241 (1.010)coding (1208/1539 nt) RCAP_rcc02659 monosacharide ABC transporter ATP‑binding protein
Rejected: Position hash score below cutoff.

GGCCGGCGAGTCCGTCGGTCAGGCTGTCGACATAGGCCTTGTTGGCGGCATCATTCGCATCATCAGGCGCGCTCGTCACATTGACTTCGCCGCCGAAAGTGAC....................................................................................................  >  NC_014034/1412952‑1413054
....................................................................................................GACGAGACCGGGTTTTCCGGGCTCGCCACCTTGATCGTCAGCCGCTTGATGAAATCCAGCGCGGTCTGCGCCTCGCGTTTCAGATCGAGGTGGAAGAGTTTCG  <  NC_014034/2850713‑2850614
                                                                                                                                                                                                           
                                       TGTTGGCGGCATCATTCGCATCATCAGGCGCGCTCGTCACATTGACTTCGCCGCCGAAAGTGACGAGACCGGGTTTTCCGGGCTCGCCACCTTGATCGTCA                                                                 >  2:1969295/1‑101 (MQ=255)
                                                                  GCGCGCTCGTCACATTGACTTCGCCGCCGAAAGTGACGAGACCGGGTTTTCCGGGCTCGCCACCTTGATCGTCAGCCGCTTGATGAAATCCAGCGCGGTCT                                      <  1:1969430/101‑1 (MQ=255)
                                                                                                AAGAGACGAGACCGGGTTTTCCGGGCTCGCCACCTTGATCGCCAGCCGCTTGATGAAATCCAGCGCGGTCTGCGCCTCGCGTTTCAGATCGAGGTGGAAGA        <  1:2465285/101‑1 (MQ=255)
                                                                                                                                                                                                           
GGCCGGCGAGTCCGTCGGTCAGGCTGTCGACATAGGCCTTGTTGGCGGCATCATTCGCATCATCAGGCGCGCTCGTCACATTGACTTCGCCGCCGAAAGTGAC....................................................................................................  >  NC_014034/1412952‑1413054
....................................................................................................GACGAGACCGGGTTTTCCGGGCTCGCCACCTTGATCGTCAGCCGCTTGATGAAATCCAGCGCGGTCTGCGCCTCGCGTTTCAGATCGAGGTGGAAGAGTTTCG  <  NC_014034/2850713‑2850614

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 38 ≤  ATCG