New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 141641 =246 (1.130)2 (0.010) 2/184 37.1 0.01 coding (1250/1311 nt) RCAP_rcc00134 hypothetical protein
?NC_014034 = 171663 238 (1.000)coding (663/1383 nt) hemN1 oxygen‑independent coproporphyrinogen‑III oxidase
Rejected: Position hash score below cutoff.

GGCGATTTCCGCCGCGATCACCGCCCGGACCGACATTCTCGTGCCGGCCAGCCTTGGCTGGCCGGAACTGCATCTGGCGGCAGCTTTCCTCAGCTTTGCGGCGGTGAT...................................................................................................  <  NC_014034/141748‑141641
....................................................................................................GCGGTGATCGTCGATCTGATCTATGGCCTGCCCGGTCAGAGCCCCGAGGATGTCGCCGCCGACGTGCGGCTTTGCGCCGATCTGGGGCTCGACGGGCTGGACCTTTA  <  NC_014034/171663‑171565
                                                                                                                                                                                                               
                                     CTCGTGCCGGCCAGCCTTGGCTGGCCGGAACTGCATCTGGCGGCAGCTTTCCTCAGCTTTGCGGCGGTGATCGTCGATCTGATCTATGGCCTGCCCGGTCA                                                                       >  1:770147/1‑101 (MQ=255)
                                                                      CATCTGGCGGCAGCTTTCCTCAGCTTTGCGGCGGTGATCGTCGATCTGATCTATGGCCTGCCCGGTCAGAGCCCCGAGGATGTCGCCGCCGACGTGCGGCT                                      <  2:770072/101‑1 (MQ=255)
                                                                                                                                                                                                               
GGCGATTTCCGCCGCGATCACCGCCCGGACCGACATTCTCGTGCCGGCCAGCCTTGGCTGGCCGGAACTGCATCTGGCGGCAGCTTTCCTCAGCTTTGCGGCGGTGAT...................................................................................................  <  NC_014034/141748‑141641
....................................................................................................GCGGTGATCGTCGATCTGATCTATGGCCTGCCCGGTCAGAGCCCCGAGGATGTCGCCGCCGACGTGCGGCTTTGCGCCGATCTGGGGCTCGACGGGCTGGACCTTTA  <  NC_014034/171663‑171565

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG