New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 145465254 (1.160)2 (0.010) 2/184 37.1 0.01 coding (54/426 nt) RCAP_rcc00137 hypothetical protein
?NC_014034 = 3048462 212 (0.890)coding (1442/3477 nt) RCAP_rcc02857 diguanylate cyclase/phosphodiesterase
Rejected: Position hash score below cutoff.

TTGCAGGCCCCGGAACCCCGGGGCCTGTTTCCGTTTCCATTGACAGGTTTGCCGATGCACCGCCGCCAGTTTCTTGCCCTTGCCCCCGCGCTGATCCTGGCCCCGGCC....................................................................................................  >  NC_014034/145358‑145465
....................................................................................................CCCCGGCCAGATCGGGCAGCCGGGCGCTGAAATAGGGCAGCATCATCTGCCCCGAGGCCGCCATCCGGCATTCGAACAGCGCGCCCGGCGCATTGTCGGCAAGGGTGT  <  NC_014034/3048462‑3048363
                                                                                                                                                                                                                
                                                             GCCGCCAGTTTCTTGCCCTTGCCCCCGCGCTGATCCTGGCCCCGGCCAGATCGGGCAGCCGGGCGCTGAAATAGGGCAGCATCATCTGCCCCGAGGCCGCC                                                >  2:4039833/1‑101 (MQ=255)
                                                              CCGCCAGTTTCTTGCCCTTGCCCCCGCGCTGATCCTGGCCCCGGCCAGATCGGGCAGCCGGGCGCTGAAATAGGGCAGCATCATCTGCCCCGAGGCCGCCA                                               <  1:4040118/101‑1 (MQ=255)
                                                                                                                                                                                                                
TTGCAGGCCCCGGAACCCCGGGGCCTGTTTCCGTTTCCATTGACAGGTTTGCCGATGCACCGCCGCCAGTTTCTTGCCCTTGCCCCCGCGCTGATCCTGGCCCCGGCC....................................................................................................  >  NC_014034/145358‑145465
....................................................................................................CCCCGGCCAGATCGGGCAGCCGGGCGCTGAAATAGGGCAGCATCATCTGCCCCGAGGCCGCCATCCGGCATTCGAACAGCGCGCCCGGCGCATTGTCGGCAAGGGTGT  <  NC_014034/3048462‑3048363

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG