| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 1473410 = | 163 (0.890) | 11 (0.060) | 5/154 | 30.2 | 0.07 | intergenic (+117/+102) | nadE/RCAP_rcc01367 | NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein |
| ? | NC_014034 | 2853102 = | 130 (0.550) | intergenic (+100/+128) | RCAP_rcc02661/RCAP_rcc02662 | DeoR family transcriptional regulator/class II aldolase/adducin N‑terminal domain‑containing protein/short‑chain dehydrogenase/reductase family oxidoreductase | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
GCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCC................................................................................................... < NC_014034/1473530‑1473410
....................................................................................................CGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTTGCCCTGACGGGCGGGGAAAGGCG > NC_014034/2853102‑2853200
tgtttcAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGC < 2:1655337/95‑1 (MQ=255)
tgctccAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGC < 1:3217279/95‑1 (MQ=255)
gAAGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAA < 2:647695/100‑1 (MQ=255)
AGGCCCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACC < 1:3276785/101‑1 (MQ=255)
GGCCCCCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCG < 1:3537526/101‑1 (MQ=255)
CCCTGGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTT < 2:75038/101‑1 (MQ=255)
CCTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTTG < 2:2891886/101‑1 (MQ=255)
CTCGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGGCGTGCTGAACCGTTGC > 2:3711934/1‑101 (MQ=255)
GCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCC................................................................................................... < NC_014034/1473530‑1473410
....................................................................................................CGGCCAGCGCCCGCCCCGCCCATGGCGGGCGCTTCTCGCCCGCCGGGGCTGGCGCCGGCCTCTGGTGTGCTTGGGGATGCGGTCGTGCTGAACCGTTGCCCTGACGGGCGGGGAAAGGCG > NC_014034/2853102‑2853200
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|