New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1495631 =202 (0.910)2 (0.010) 2/186 37.3 0.01 coding (354/858 nt) RCAP_rcc01387 RpiR family transcriptional regulator
?NC_014034 2357619 = 216 (0.910)coding (456/1026 nt) potF polyamine ABC transporter periplasmic polyamine‑binding protein PotF
Rejected: Position hash score below cutoff.

GGGGCGCGGCGCAGTTGCCCGGCGCCGATCTGGGGCTGCGGCTTCTGGATGGCGAGATGGGCACGCTCCTTCGCCGCGATGCCGAGGCGGTGCTGGCGCTCGCCGCC....................................................................................................  <  NC_014034/1495737‑1495631
....................................................................................................CGCCGCCGGAGCTGGAGGGCAAGATCAACGTCATTCCCGAGATGGGCGACGTGATGGCGATTGCCACGATGTATGCGGGCGGCAAGGTCTGTTCGGATGATCCCGCC  >  NC_014034/2357619‑2357718
                                                                                                                                                                                                               
                                                                   atcTCGCCGCGATGCCGAGGCGGTGCTGGCGCTCGCCGCCGGAGCTGGAGGGCAAGATCAACGTCATTCCCGAGATGGGCGACGTGATGGCGATTGCCACG                                         <  1:3641143/98‑1 (MQ=255)
                                                                       CGCCGCGATGCCGAGGCGGTGCTGGCGCTCGCCGCCGGAGCTGGAGGGCAAGATCAACGTCATTCCCGAGATGGGCGACGTGATGGCGATTGCCACGAgat                                     >  2:3640875/1‑98 (MQ=255)
                                                                                                                                                                                                               
GGGGCGCGGCGCAGTTGCCCGGCGCCGATCTGGGGCTGCGGCTTCTGGATGGCGAGATGGGCACGCTCCTTCGCCGCGATGCCGAGGCGGTGCTGGCGCTCGCCGCC....................................................................................................  <  NC_014034/1495737‑1495631
....................................................................................................CGCCGCCGGAGCTGGAGGGCAAGATCAACGTCATTCCCGAGATGGGCGACGTGATGGCGATTGCCACGATGTATGCGGGCGGCAAGGTCTGTTCGGATGATCCCGCC  >  NC_014034/2357619‑2357718

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 39 ≤  ATCG