New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1557762 =185 (0.850)2 (0.010) 2/184 37.1 0.01 coding (719/1002 nt) fepD2 ferric enterobactin transport system permease FepD
?NC_014034 2590122 = 139 (0.590)intergenic (‑21/‑235) glnE/RCAP_rcc02415 glutamate‑ammonia‑ligase adenylyltransferase/hypothetical protein
Rejected: Position hash score below cutoff.

GGTTTGCGCGGCGCTGGCGCTGGCGCGGCCGCTCGATGCGCTGGCGCTGGGAAAGGAGTTCGGCCAGAGCCTTGGCGCCGATCCGCGCCGGATCTGGTTTGCCGCCGC...................................................................................................  <  NC_014034/1557869‑1557762
....................................................................................................GCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGCAGCGCCCCCGCCGGGTCGCCTCGGC  >  NC_014034/2590122‑2590220
                                                                                                                                                                                                               
                                                    AAGGAGTTCGGCCAGAGCCTTGGCGCCGATCCGCGCCGGATCTGGTTTGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTG                                                        >  2:750584/1‑101 (MQ=255)
                                                               CCAGAGCCTTGGCGCCGATCCGCGCCGGATCTGGTTTGCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATC                                             <  1:750659/101‑1 (MQ=255)
                                                                                                                                                                                                               
GGTTTGCGCGGCGCTGGCGCTGGCGCGGCCGCTCGATGCGCTGGCGCTGGGAAAGGAGTTCGGCCAGAGCCTTGGCGCCGATCCGCGCCGGATCTGGTTTGCCGCCGC...................................................................................................  <  NC_014034/1557869‑1557762
....................................................................................................GCCGCCGCAAGCCCCGGGTCAAGGCGCGCAAATGCCCCGCCCCTGTCATCTTGGCGCGAATATCCCGGGGGGTGCGGGGGGCAGCGCCCCCGCCGGGTCGCCTCGGC  >  NC_014034/2590122‑2590220

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG