New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1606239225 (1.050)2 (0.010) 2/180 36.7 0.01 coding (1422/1452 nt) murF UDP‑N‑acetylmuramoyl‑tripeptide‑‑D‑alanyl‑D‑ alanine ligase
?NC_014034 2233485 = 207 (0.870)coding (1023/2772 nt) RCAP_rcc02068 ice nucleation protein repeat family protein
Rejected: Position hash score below cutoff.

CCCGCGCGCCGCATCTGGTCGATGCAGGGGATGTGGTGCTGGTAAAAGGATCGAAAGGCTCGAAGGTTTCGCTCGTGGTTGACGCGCTCAGAAAACTCGGTCAGCCCGGC..................................................................................................  >  NC_014034/1606130‑1606239
....................................................................................................TCAGCCCGGCCACGGTCGCGGTGCTCAGGCCCTGCAGCTGCGTCGAGGAGAGCGCGGCCAGCTGCGCGGTGGTCAGCGCGGCAACCTCGGTCGAGGTCAGGTTGGTGC  >  NC_014034/2233485‑2233582
                                                                                                                                                                                                                
                                                   CGAAAGGCTCGAAGGTTTCGCTCGTGGTTGACGCGCTCAGAAAACTCGGTCAGCCCGGCCACGGTCGCGGTGCTCAGGCCCTGCAGCTGCGTCGAGGAGAG                                                          >  2:52306/1‑101 (MQ=255)
                                                          CTCGAAGGTTTCGCTCGTGGTTGACGCGCTCAGAAAACTCGGTCAGCCCGGCCACGGTCGCGGTGCTCAGGCCCTGCAGCTGCGTCGAGGAGAGCGCGGCC                                                   <  1:52312/101‑1 (MQ=255)
                                                                                                                                                                                                                
CCCGCGCGCCGCATCTGGTCGATGCAGGGGATGTGGTGCTGGTAAAAGGATCGAAAGGCTCGAAGGTTTCGCTCGTGGTTGACGCGCTCAGAAAACTCGGTCAGCCCGGC..................................................................................................  >  NC_014034/1606130‑1606239
....................................................................................................TCAGCCCGGCCACGGTCGCGGTGCTCAGGCCCTGCAGCTGCGTCGAGGAGAGCGCGGCCAGCTGCGCGGTGGTCAGCGCGGCAACCTCGGTCGAGGTCAGGTTGGTGC  >  NC_014034/2233485‑2233582

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG