New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1634067	203 (0.950)	2 (0.010)	2/180	36.7	0.01	coding (556/2679 nt)	RCAP_rcc01506	signal transduction histidine kinase
	?	NC_014034	= 3201097	235 (0.990)					coding (153/660 nt)	RCAP_rcc03011	winged helix family two component transcriptional regulator
Rejected: Position hash score below cutoff.

GAGAGCGAGCCCGTCTGCCGCATCCCGAAGCGCCAGAGCGACCAGGTGATGACAAGCCCCGCGGTGATCGCGGCCAGAAGCGCCGTGGTCAGCGAGGCGAGCAGCATCAG....................................................................................................  >  NC_014034/1633958‑1634067 ....................................................................................................GCAGCATCAGATCGAGCAGGATCAGATCATAGGCCGCCACCGCCAGCGCATCCGCGGCCTGATCCAGCCGCATCGCCCAATCGACCGAATGGCCGTCGGCGGCCACCTGA  <  NC_014034/3201097‑3200998                                                                                                                                                                                                                                                                                   GTGATCGCGGCCAGAAGCGCCGTGGTCAGCGAGGCGAGCAGCATCAGATCGAGCAGGATCAGATCATAGGCCGCCACCGCCAGCGCATCCGCGGCCTGATC                                                >  1:2066227/1‑101 (MQ=255)                                                                          CCAGAAGCGCCGTGGTCAGCGAGGCGAGCAGCATCAGATCGAGCAGGATCAGATCATAGGCCGCCACCGCCAGCGCATCCGCGGCCTGATCCAGCCGCATC                                      <  2:2066087/101‑1 (MQ=255)                                                                                                                                                                                                                    GAGAGCGAGCCCGTCTGCCGCATCCCGAAGCGCCAGAGCGACCAGGTGATGACAAGCCCCGCGGTGATCGCGGCCAGAAGCGCCGTGGTCAGCGAGGCGAGCAGCATCAG....................................................................................................  >  NC_014034/1633958‑1634067 ....................................................................................................GCAGCATCAGATCGAGCAGGATCAGATCATAGGCCGCCACCGCCAGCGCATCCGCGGCCTGATCCAGCCGCATCGCCCAATCGACCGAATGGCCGTCGGCGGCCACCTGA  <  NC_014034/3201097‑3200998 Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG