New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1642055212 (0.970)2 (0.010) 2/184 37.1 0.01 coding (72/648 nt) RCAP_rcc01514 glutathione S‑transferase
?NC_014034 2936169 = 218 (0.920)coding (757/3084 nt) RCAP_rcc02747 acriflavin resistance protein family
Rejected: Position hash score below cutoff.

GGCGGCGCTGATCCGTCTGGCCGAGGAGGAAGCGGCATGACGATTCTGCATCACATCCCGGGCTCGCGTTCGCATCGGGTGCTGTGGCTTTTGGAAGAGCTGGGCGAG...................................................................................................  >  NC_014034/1641948‑1642055
....................................................................................................TGGGCGAGATCTTCTTTCGGCTCTCCGATGTGGCGACCGTGCGCGCGGGCTTTGCCGATCCGCCCGACACCCTGTTTCGCTACAACGGCCAGCCCGCGGTGGGGCTG  >  NC_014034/2936169‑2936267
                                                                                                                                                                                                               
                                                   CACATCCCGGGCTCGCGTTCGCATCGGGTGCTGTGGCTTTTGGAAGAGCTGGGCGAGATCTTCTTTCGGCTCTCCGATGTGGCGACCGTGCGCGCGGGCTT                                                         >  1:1826302/1‑101 (MQ=255)
                                                                CGCGTTCGCATCGGGTGCTGTTGCTTTTGGAAGAGCTGGGCGAGATCTTCTTTCGGCTCTCCGATGTGGCGACCGTGCGCGCGGGCTTTGCCGATCCGCCC                                            <  2:1826176/101‑1 (MQ=255)
                                                                                                                                                                                                               
GGCGGCGCTGATCCGTCTGGCCGAGGAGGAAGCGGCATGACGATTCTGCATCACATCCCGGGCTCGCGTTCGCATCGGGTGCTGTGGCTTTTGGAAGAGCTGGGCGAG...................................................................................................  >  NC_014034/1641948‑1642055
....................................................................................................TGGGCGAGATCTTCTTTCGGCTCTCCGATGTGGCGACCGTGCGCGCGGGCTTTGCCGATCCGCCCGACACCCTGTTTCGCTACAACGGCCAGCCCGCGGTGGGGCTG  >  NC_014034/2936169‑2936267

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG